FAIRMol

OHD_TbNat_133

Pose ID 20802 Compound 2138 Pose 286

DB Docking_panel_21Docking pose analysis is being read from this database.
Molecular metrics status: queued
Pose metrics recompute is queued in the background.
Metrics cached · SASA missing
T11
Silent information regulator 2-related protein 1 (SIR2RP1 / sirtuin-like deacetylase) Leishmania infantum
Ligand OHD_TbNat_133
PDB5OL0

3D complex viewer

Strict H-bonds Permissive H-bonds
Viewer legend
Protein receptor
Pocket residues
Cofactor context
Docked ligand
Overall assessment
Weak No SASA yet
Weak or marginal quality
Binding strong Geometry high Native strong SASA missing
Strain ΔE
not computed
Protein clashes
2
Internal clashes
2
Native overlap
contact recall 0.61, Jaccard 0.61, H-bond role recall 0.60
Burial
88%
Reason: no major geometry red flags detected
2 protein-contact clashes

Interaction summary

HB 10 HY 22 PI 1 CLASH 2
Final rank60.491Score-16.510
Inter norm-0.746Intra norm0.086
Top1000noExcludedyes
Contacts11H-bonds8
Artifact reasonexcluded; geometry warning; 10 clashes; 3 protein clashes
Residues
GLN220 GLU192 GLY191 HIS144 HIS222 LEU194 PHE189 PHE190 PRO223 VAL188 VAL221

Protein summary

287 residues
Protein targetT11Atoms4391
Residues287Chains1
Residue summaryLEU:627; ARG:432; VAL:384; GLU:316; PHE:300; ILE:285; ALA:260; PRO:238; HIS:187; ASP:157; LYS:154; SER:154; THR:154; GLY:147; ASN:140; TYR:126

Native ligand reference

★ reference
Interaction fingerprint calculated directly from the uploaded native ligand without docking. Current H-bond mode: permissive.
Name5OL0Contacts18
PoseOpen native poseHB0
IFP residues
ASN193 GLN220 GLU192 GLY191 HIS144 HIS222 ILE126 LEU194 LEU226 PHE189 PHE190 PHE199 PHE74 PRO223 THR71 VAL187 VAL188 VAL221
Current overlap11Native recall0.61
Jaccard0.61RMSD-
HB strict3Strict recall0.60
HB same residue+role3HB role recall0.60
HB same residue3HB residue recall0.75

HB · H-bonds

Mode: permissive. Count shows atom-level H-bonds; unique residues in summary: 0.

PI · π–π interactions

Native π–π recall is disabled because no explicit native π–π reference was stored.

HY · Hydrophobic contacts

CLASH · Clashes

All stored poses for this docking hit

PoseFinal rankInter normScoreHBCTCT overlapCT recallHB role rec.RMSDExcluded
297 3.2211738431491166 -0.864738 -18.5718 9 14 0 0.00 0.00 - no Open
308 3.5087234376880794 -0.630012 -14.5807 4 8 0 0.00 0.00 - no Open
306 4.057646317453305 -0.887122 -20.4622 9 16 0 0.00 0.00 - no Open
305 4.092809376413224 -0.82462 -18.5825 9 14 0 0.00 0.00 - no Open
304 4.225145166630216 -0.708658 -15.5749 6 9 0 0.00 0.00 - no Open
285 4.249418341164932 -0.65245 -14.6771 4 15 9 0.50 0.20 - no Open
310 4.50626898358551 -0.687702 -16.3842 6 9 0 0.00 0.00 - no Open
302 4.785093596347734 -0.806011 -18.425 8 10 0 0.00 0.00 - no Open
305 4.922064754170995 -0.699833 -16.5693 7 9 0 0.00 0.00 - no Open
288 4.554390857974641 -0.639525 -14.7458 3 16 9 0.50 0.20 - yes Open
281 4.776109144064239 -0.742629 -17.3765 4 15 9 0.50 0.20 - yes Open
301 5.037608024330254 -0.817933 -17.3255 6 9 0 0.00 0.00 - yes Open
299 5.2574366539639055 -0.956248 -23.4014 7 17 0 0.00 0.00 - yes Open
307 5.280946610901014 -0.836887 -20.4301 7 17 0 0.00 0.00 - yes Open
298 5.6047971296873405 -0.920587 -22.0862 8 16 0 0.00 0.00 - yes Open
306 5.750751610476967 -0.790839 -18.0037 10 10 0 0.00 0.00 - yes Open
283 6.752448489660804 -0.904092 -22.1352 10 12 12 0.67 0.60 - yes Open
311 6.809373492885872 -0.694931 -16.7778 4 11 0 0.00 0.00 - yes Open
303 6.912699788412837 -0.932883 -18.8898 5 11 0 0.00 0.00 - yes Open
279 6.974694134065902 -0.963395 -22.8184 10 12 11 0.61 0.60 - yes Open
280 7.346743268228622 -0.86208 -19.3589 7 12 12 0.67 0.40 - yes Open
284 7.59453275720647 -0.837326 -19.029 6 12 12 0.67 0.40 - yes Open
287 7.716124711807044 -0.845206 -20.9657 9 13 12 0.67 0.60 - yes Open
302 7.943369928984632 -0.862673 -20.8085 8 14 0 0.00 0.00 - yes Open
277 8.513297315555713 -0.761015 -16.1742 5 15 9 0.50 0.20 - yes Open
304 10.10650623057056 -0.85949 -21.2079 8 12 0 0.00 0.00 - yes Open
301 10.533268992998238 -0.793389 -19.6362 7 12 0 0.00 0.00 - yes Open
300 55.80705810478515 -0.936674 -22.8883 8 15 0 0.00 0.00 - yes Open
308 55.85755710342858 -0.885175 -21.8304 9 15 0 0.00 0.00 - yes Open
307 56.48257294641266 -0.752595 -18.7247 6 10 0 0.00 0.00 - yes Open
309 56.66100439252402 -0.724033 -17.5106 4 10 0 0.00 0.00 - yes Open
300 57.7419765176045 -0.823352 -19.6883 6 10 0 0.00 0.00 - yes Open
278 58.35124707003621 -0.928095 -21.3004 9 10 10 0.56 0.60 - yes Open
282 59.534966679708056 -0.904325 -21.9167 8 10 10 0.56 0.60 - yes Open
286 60.49135001113572 -0.746427 -16.5104 8 11 11 0.61 0.60 - yes Current
303 61.532738818960155 -0.889334 -21.659 8 14 0 0.00 0.00 - yes Open

Molecular metrics

RDKit SASA burial, strain energy (MMFF94s), ligand efficiency and fit quality for this docking pose.
⚠ Not yet computed
Molecular metrics have not been computed for this pose yet. This page now reads only cached values; use a background recompute when you want fresh metrics without slowing the UI.