T. cruzi R5P · T21
T. cruzi
PDB 3K7O
Protein: Ribose-5-phosphate isomerase B
Targets
1
each capped at 50 ligands
Best-pose candidates
588
one best pose per ligand per target
Synth metric
SA score
direct SA metric
Absolute burial proxy
n_exposed
absolute exposed hydrophobic atoms, not fraction
Pareto front 1
18
non-dominated ligands across all selected targets
Burial source
FreeSASA 200
Proxy 0 · Missing 0
Metrics coverage
Done 200
Pending 0 · Failed 0 · Missing 0
Diversity shortlist
Novelty 0.45
High novelty 200 · Close analogs 0
New vs legacy top 50
Added 4 · Dropped 4
Stayed 196 of 200 legacy picks
T21
Native
Front 1: 18
200 / 588 shortlisted
Best: Z2939836159 · score 67.9
Pareto layers observed: 13
Metrics: done 200 · pending 0 · failed 0 · missing 0
Diversity: novelty 0.45 · close analogs 0
New vs legacy: added 4 · dropped 4 · stayed 196/200
Added: Z56174642, Z19651549, ulfkktlib_2013
·
Dropped: TC92, MK151, Z2232931715
| Target | 2D | Rank | Pareto | Assessment | Ligand | Compromise | Docking | Final rank | Inter norm | n_exposed | Strain dE | MW | cLogP | TPSA | SA score | Safety | Native sim | PAINS | Reactive | QED | SASA | Flags | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| T21 T21 |
|
1 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z2939836159
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 1 clash; 1 protein clash.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 171.2 · logP -1.46 · TPSA 117.8
|
67.9 | 0.73 | 1.1885 | -2.0093 | 2 | 14.93 | 171.2 | -1.46 | 117.8 | 3.400 | 0.73 | 0.89 | 0 | 0 | 0.51 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 1 clash; 1 protein clash
|
|
| T21 T21 |
|
2 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z104482518
strong docking, well-buried hydrophobics, native-like contacts
DetailsWhy selected: Strong docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 5 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 189.2 · logP 2.19 · TPSA 53.1
|
66.9 | 0.84 | -0.3396 | -1.7851 | 1 | 8.29 | 189.2 | 2.19 | 53.1 | 1.718 | 0.76 | 0.90 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 5 protein contact clashes
|
|
| T21 T21 |
|
3 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Suspicious
Data
Complete
Action
Inspect
|
TC218
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein contact clashes.
Action: Inspect the pose manually, especially around clashes, hydrogen bonds, and pocket fit.
MW 328.5 · logP 4.64 · TPSA 29.5
|
64.9 | 0.67 | 0.1530 | -1.0204 | 2 | 10.77 | 328.5 | 4.64 | 29.5 | 5.008 | 0.76 | 0.71 | 0 | 0 | 0.66 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 6 clashes; 3 protein contact clashes
|
|
| T21 T21 |
|
4 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z2737721067
strong docking, well-buried hydrophobics, native-like contacts
DetailsWhy selected: Strong docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 6 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 282.3 · logP 3.59 · TPSA 78.4
|
62.8 | 0.76 | 0.5516 | -1.4024 | 1 | 16.82 | 282.3 | 3.59 | 78.4 | 2.360 | 0.70 | 0.74 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 6 protein contact clashes
|
|
| T21 T21 |
|
5 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56802793
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 4 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 294.4 · logP 3.38 · TPSA 46.5
|
59.8 | 0.73 | -0.0220 | -1.3505 | 1 | 11.68 | 294.4 | 3.38 | 46.5 | 2.495 | 0.73 | 0.59 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 4 protein contact clashes
|
|
| T21 T21 |
|
6 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1198149433
strong docking, well-buried hydrophobics, native-like contacts
DetailsWhy selected: Strong docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 176.2 · logP 1.37 · TPSA 62.0
|
62.4 | 0.82 | 0.5625 | -2.1004 | 2 | 2.71 | 176.2 | 1.37 | 62.0 | 2.167 | 0.76 | 0.68 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 1 protein clash
|
|
| T21 T21 |
|
7 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z359513850
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 238.2 · logP 2.71 · TPSA 66.2
|
59.5 | 0.61 | 1.2407 | -1.3709 | 0 | 9.86 | 238.2 | 2.71 | 66.2 | 1.921 | 0.73 | 0.74 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T21 T21 |
|
8 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Suspicious
Data
Complete
Action
Inspect
|
TC229
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 3 protein contact clashes.
Action: Inspect the pose manually, especially around clashes, hydrogen bonds, and pocket fit.
MW 330.5 · logP 4.31 · TPSA 40.5
|
64.6 | 0.68 | 0.1100 | -1.0594 | 3 | 12.74 | 330.5 | 4.31 | 40.5 | 4.955 | 0.76 | 0.76 | 0 | 0 | 0.70 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 5 clashes; 3 protein contact clashes
|
|
| T21 T21 |
|
9 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2271
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes; moderate strain Δ 22.6, geometry warning, and strain ΔE = 22.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 224.2 · logP 1.79 · TPSA 74.6
|
58.4 | 0.62 | 1.9313 | -1.7084 | 0 | 22.62 | 224.2 | 1.79 | 74.6 | 1.890 | 0.76 | 0.68 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes; moderate strain Δ 22.6
|
|
| T21 T21 |
|
10 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z31076755
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 346.8 · logP 3.47 · TPSA 69.4
|
56.9 | 0.52 | 1.7416 | -1.1512 | 0 | 10.78 | 346.8 | 3.47 | 69.4 | 2.452 | 0.73 | 0.76 | 0 | 0 | 0.53 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash
|
|
| T21 T21 |
|
11 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC1_188
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 2 protein clashes.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 290.4 · logP 3.67 · TPSA 40.5
|
63.1 | 0.54 | 2.1111 | -1.2547 | 2 | 10.56 | 290.4 | 3.67 | 40.5 | 4.041 | 0.76 | 0.77 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 5 clashes; 2 protein clashes
|
|
| T21 T21 |
|
12 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_93
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 6 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 287.3 · logP 0.75 · TPSA 62.2
|
56.5 | 0.60 | 0.8136 | -1.1439 | 0 | 14.35 | 287.3 | 0.75 | 62.2 | 4.165 | 0.76 | 0.73 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 6 protein contact clashes
|
|
| T21 T21 |
|
13 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0153
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 2 protein clashes; moderate strain Δ 24.2, geometry warning, and strain ΔE = 24.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 225.2 · logP -0.65 · TPSA 97.0
|
56.0 | 0.64 | 2.4363 | -1.9451 | 0 | 24.22 | 225.2 | -0.65 | 97.0 | 4.247 | 0.73 | 0.68 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 2 protein clashes; moderate strain Δ 24.2
|
|
| T21 T21 |
|
14 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1977911285
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 291.4 · logP 3.12 · TPSA 66.4
|
57.6 | 0.56 | 1.3774 | -1.2116 | 1 | 9.38 | 291.4 | 3.12 | 66.4 | 1.937 | 0.76 | 0.72 | 0 | 0 | 0.91 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash
|
|
| T21 T21 |
|
15 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57158549
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 250.3 · logP 1.93 · TPSA 74.6
|
57.9 | 0.46 | 2.9080 | -1.4421 | 0 | 3.80 | 250.3 | 1.93 | 74.6 | 1.697 | 0.76 | 0.84 | 0 | 0 | 0.85 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes
|
|
| T21 T21 |
|
16 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC50
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 1 protein clash.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 302.5 · logP 4.08 · TPSA 32.8
|
58.2 | 0.65 | 0.8185 | -1.1841 | 2 | 11.14 | 302.5 | 4.08 | 32.8 | 4.702 | 0.48 | 0.76 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, geometry warning; 5 clashes; 1 protein clash
|
|
| T21 T21 |
|
17 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Suspicious
Data
Complete
Action
Inspect
|
TC61
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 4 protein contact clashes.
Action: Inspect the pose manually, especially around clashes, hydrogen bonds, and pocket fit.
MW 377.4 · logP 5.28 · TPSA 20.2
|
58.3 | 0.69 | 0.1935 | -1.1166 | 4 | 11.69 | 377.4 | 5.28 | 20.2 | 4.588 | 0.46 | 0.69 | 0 | 0 | 0.45 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 5 clashes; 4 protein contact clashes
|
|
| T21 T21 |
|
18 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Suspicious
Data
Complete
Action
Inspect
|
3K7O
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: Native reference ligand.
Action: Inspect the pose manually, especially around clashes, hydrogen bonds, and pocket fit.
MW 258.1 · logP -2.39 · TPSA 164.1
|
39.3 | 0.00 | - | - | 4 | - | 258.1 | -2.39 | 164.1 | 4.789 | 0.32 | 1.00 | 0 | 0 | 0.29 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Native reference ligand
|
|
| T21 T21 |
|
19 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1269163651
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 2 clashes; 2 protein clashes.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 207.2 · logP -3.26 · TPSA 104.4
|
63.8 | 0.62 | 2.1721 | -1.7982 | 2 | 17.90 | 207.2 | -3.26 | 104.4 | 3.831 | 0.70 | 0.75 | 0 | 0 | 0.33 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 2 clashes; 2 protein clashes
|
|
| T21 T21 |
|
20 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z2298067197
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 12 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 207.3 · logP 0.16 · TPSA 81.1
|
58.2 | 0.70 | 0.7254 | -1.6455 | 2 | 10.19 | 207.3 | 0.16 | 81.1 | 2.947 | 0.73 | 0.74 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 12 protein contact clashes
|
|
| T21 T21 |
|
21 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z2940609369
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 8 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 271.3 · logP 2.23 · TPSA 72.7
|
58.1 | 0.66 | 0.9966 | -1.3950 | 1 | 7.66 | 271.3 | 2.23 | 72.7 | 2.818 | 0.73 | 0.69 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 8 protein contact clashes
|
|
| T21 T21 |
|
22 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z25755775
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 4 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 266.3 · logP 3.19 · TPSA 38.1
|
57.9 | 0.67 | 0.4030 | -1.2386 | 3 | 10.07 | 266.3 | 3.19 | 38.1 | 1.947 | 0.73 | 0.73 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 4 protein contact clashes
|
|
| T21 T21 |
|
23 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z2755722093
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 254.3 · logP 1.80 · TPSA 76.2
|
59.7 | 0.66 | 0.9237 | -1.5559 | 1 | 13.90 | 254.3 | 1.80 | 76.2 | 2.598 | 0.73 | 0.88 | 0 | 0 | 0.81 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 1 protein clash
|
|
| T21 T21 |
|
24 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z46032342
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 4 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 282.3 · logP 3.06 · TPSA 55.8
|
56.9 | 0.62 | 0.6705 | -1.1704 | 3 | 10.46 | 282.3 | 3.06 | 55.8 | 2.033 | 0.76 | 0.77 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 4 protein contact clashes
|
|
| T21 T21 |
|
25 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TB2021_12
well-buried hydrophobics
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 9 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 250.3 · logP -0.28 · TPSA 117.3
|
55.7 | 0.71 | 0.4810 | -1.4748 | 1 | 15.83 | 250.3 | -0.28 | 117.3 | 4.068 | 0.70 | 0.60 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 9 protein contact clashes
|
|
| T21 T21 |
|
26 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC345
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 222.2 · logP -0.19 · TPSA 107.0
|
56.5 | 0.64 | 1.8620 | -1.7107 | 2 | 9.06 | 222.2 | -0.19 | 107.0 | 3.167 | 0.73 | 0.71 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 2 protein clashes
|
|
| T21 T21 |
|
27 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TbNat_134
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 286.2 · logP 1.09 · TPSA 108.0
|
55.2 | 0.59 | 1.6273 | -1.3791 | 0 | 17.08 | 286.2 | 1.09 | 108.0 | 3.205 | 0.73 | 0.62 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T21 T21 |
|
28 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49539320
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 9 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 242.3 · logP 2.25 · TPSA 70.4
|
56.4 | 0.62 | 1.0099 | -1.3392 | 3 | 13.47 | 242.3 | 2.25 | 70.4 | 2.227 | 0.76 | 0.75 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 9 protein contact clashes
|
|
| T21 T21 |
|
29 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z44089721
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 6 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 291.4 · logP 2.08 · TPSA 37.6
|
55.0 | 0.54 | 1.2481 | -1.0961 | 0 | 11.27 | 291.4 | 2.08 | 37.6 | 3.756 | 0.73 | 0.74 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 6 protein contact clashes
|
|
| T21 T21 |
|
30 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45614013
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 312.4 · logP 1.13 · TPSA 106.3
|
55.3 | 0.44 | 2.7981 | -1.2860 | 0 | 13.40 | 312.4 | 1.13 | 106.3 | 1.643 | 0.73 | 0.79 | 0 | 0 | 0.88 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes
|
|
| T21 T21 |
|
31 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z46095146
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 268.3 · logP 2.76 · TPSA 66.8
|
54.7 | 0.50 | 2.0057 | -1.2298 | 1 | 14.04 | 268.3 | 2.76 | 66.8 | 2.272 | 0.76 | 0.73 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash
|
|
| T21 T21 |
|
32 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z2235799010
well-buried hydrophobics
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 22.8, geometry warning, and strain ΔE = 22.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 241.3 · logP 1.56 · TPSA 63.7
|
54.3 | 0.61 | 1.4538 | -1.4547 | 0 | 22.83 | 241.3 | 1.56 | 63.7 | 3.584 | 0.73 | 0.55 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 22.8
|
|
| T21 T21 |
|
33 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56891524
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 4 protein contact clashes; high strain Δ 31.4, geometry warning, and strain ΔE = 31.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 264.3 · logP -0.24 · TPSA 71.7
|
53.8 | 0.71 | -0.0303 | -1.4291 | 3 | 31.42 | 264.3 | -0.24 | 71.7 | 3.667 | 0.76 | 0.70 | 0 | 0 | 0.66 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 4 protein contact clashes; high strain Δ 31.4
|
|
| T21 T21 |
|
34 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1521553721
native-like contacts, clean safety profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 4 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 296.4 · logP 3.61 · TPSA 40.5
|
53.8 | 0.65 | 0.3582 | -1.1459 | 5 | 9.66 | 296.4 | 3.61 | 40.5 | 3.935 | 0.76 | 0.74 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 4 protein contact clashes
|
|
| T21 T21 |
|
35 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TB2021_13
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 7 protein contact clashes; moderate strain Δ 28.2, geometry warning, and strain ΔE = 28.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 251.3 · logP -1.09 · TPSA 107.2
|
55.3 | 0.72 | 0.4091 | -1.4734 | 1 | 28.20 | 251.3 | -1.09 | 107.2 | 5.024 | 0.73 | 0.68 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 7 protein contact clashes; moderate strain Δ 28.2
|
|
| T21 T21 |
|
36 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0139
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 2 protein clashes; moderate strain Δ 25.5, geometry warning, and strain ΔE = 25.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 225.2 · logP -0.48 · TPSA 97.0
|
56.0 | 0.62 | 2.1593 | -1.7825 | 0 | 25.48 | 225.2 | -0.48 | 97.0 | 4.125 | 0.73 | 0.72 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 2 protein clashes; moderate strain Δ 25.5
|
|
| T21 T21 |
|
37 | 2 Front 2 |
Binding
Medium
Geometry
Suspicious
Data
Complete
Action
Inspect
|
TC591
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 5 protein contact clashes.
Action: Inspect the pose manually, especially around clashes, hydrogen bonds, and pocket fit.
MW 372.5 · logP 4.39 · TPSA 49.7
|
58.1 | 0.57 | 1.0050 | -0.9250 | 3 | 12.97 | 372.5 | 4.39 | 49.7 | 5.189 | 0.58 | 0.79 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 10 clashes; 5 protein contact clashes
|
|
| T21 T21 |
|
38 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_346
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 401.7 · logP 4.42 · TPSA 66.4
|
49.9 | 0.50 | 1.7776 | -1.0710 | 0 | 10.23 | 401.7 | 4.42 | 66.4 | 2.567 | 0.43 | 0.73 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T21 T21 |
|
39 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_ACDS_23
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 276.4 · logP 3.02 · TPSA 59.2
|
53.1 | 0.48 | 2.6148 | -1.3106 | 1 | 7.33 | 276.4 | 3.02 | 59.2 | 2.641 | 0.73 | 0.67 | 0 | 0 | 0.52 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes
|
|
| T21 T21 |
|
40 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57122620
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 320.3 · logP 4.17 · TPSA 69.1
|
52.5 | 0.55 | 1.8613 | -1.1706 | 1 | 8.59 | 320.3 | 4.17 | 69.1 | 2.450 | 0.50 | 0.69 | 0 | 0 | 0.66 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash
|
|
| T21 T21 |
|
41 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57389504
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 323.2 · logP 2.97 · TPSA 70.1
|
48.9 | 0.36 | 3.4029 | -1.1600 | 1 | 13.89 | 323.2 | 2.97 | 70.1 | 2.698 | 0.65 | 0.69 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes
|
|
| T21 T21 |
|
42 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC93
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 1 protein clash.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 332.5 · logP 3.44 · TPSA 53.0
|
54.9 | 0.61 | 0.9461 | -1.0628 | 3 | 15.09 | 332.5 | 3.44 | 53.0 | 4.982 | 0.48 | 0.71 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, geometry warning; 5 clashes; 1 protein clash
|
|
| T21 T21 |
|
43 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC47
native-like contacts, clean safety profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 6 clashes; 2 protein clashes.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 304.5 · logP 4.33 · TPSA 29.5
|
56.0 | 0.53 | 1.9163 | -1.1728 | 8 | 11.47 | 304.5 | 4.33 | 29.5 | 4.104 | 0.76 | 0.77 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 6 clashes; 2 protein clashes
|
|
| T21 T21 |
|
44 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z46033738
native-like contacts, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 292.3 · logP 3.93 · TPSA 57.5
|
49.7 | 0.51 | 1.8527 | -1.0952 | 7 | 6.35 | 292.3 | 3.93 | 57.5 | 2.282 | 0.76 | 0.68 | 0 | 0 | 0.82 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash
|
|
| T21 T21 |
|
45 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z2418739356
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 311.8 · logP 3.46 · TPSA 66.4
|
55.9 | 0.57 | 1.3855 | -1.2385 | 1 | 8.83 | 311.8 | 3.46 | 66.4 | 2.005 | 0.65 | 0.72 | 0 | 0 | 0.91 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash
|
|
| T21 T21 |
|
46 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK6
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 340.4 · logP 4.49 · TPSA 58.9
|
44.4 | 0.26 | 3.8253 | -0.9625 | 4 | 10.87 | 340.4 | 4.49 | 58.9 | 3.367 | 0.76 | 0.75 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 3 protein clashes
|
|
| T21 T21 |
|
47 | 2 Front 2 |
Binding
Medium
Geometry
Suspicious
Data
Complete
Action
Inspect
|
TC534
native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 10 clashes; 5 protein contact clashes.
Action: Inspect the pose manually, especially around clashes, hydrogen bonds, and pocket fit.
MW 382.6 · logP 5.97 · TPSA 29.5
|
50.7 | 0.56 | 1.0900 | -0.8972 | 7 | 13.77 | 382.6 | 5.97 | 29.5 | 5.308 | 0.43 | 0.76 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 10 clashes; 5 protein contact clashes
|
|
| T21 T21 |
|
48 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2975
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 285.7 · logP 2.53 · TPSA 80.7
|
42.8 | 0.36 | 3.4418 | -1.2143 | 0 | 14.20 | 285.7 | 2.53 | 80.7 | 3.799 | 0.42 | 0.74 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 8 clashes; 2 protein clashes
|
|
| T21 T21 |
|
49 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC239
native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 1 protein clash.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 353.5 · logP 4.53 · TPSA 56.5
|
48.5 | 0.64 | 0.9103 | -1.0917 | 5 | 13.72 | 353.5 | 4.53 | 56.5 | 5.310 | 0.18 | 0.76 | 0 | 0 | 0.43 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, geometry warning; 5 clashes; 1 protein clash
|
|
| T21 T21 |
|
50 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z25107081
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 292.3 · logP 2.64 · TPSA 76.2
|
57.1 | 0.64 | 1.3545 | -1.4970 | 1 | 12.49 | 292.3 | 2.64 | 76.2 | 2.548 | 0.70 | 0.73 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash
|
|
| T21 T21 |
|
51 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_3054
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 2 protein clashes; moderate strain Δ 29.0, geometry warning, and strain ΔE = 29.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 184.2 · logP -0.76 · TPSA 90.3
|
55.4 | 0.64 | 1.9693 | -1.9151 | 2 | 28.96 | 184.2 | -0.76 | 90.3 | 2.669 | 0.70 | 0.80 | 0 | 0 | 0.45 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 2 protein clashes; moderate strain Δ 29.0
|
|
| T21 T21 |
|
52 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49615771
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 28.9, geometry warning, and strain ΔE = 28.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 256.3 · logP 2.44 · TPSA 85.4
|
56.8 | 0.57 | 1.4749 | -1.3028 | 1 | 28.93 | 256.3 | 2.44 | 85.4 | 2.378 | 0.73 | 0.88 | 0 | 0 | 0.45 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 28.9
|
|
| T21 T21 |
|
53 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z55164239
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 272.3 · logP 2.97 · TPSA 66.0
|
56.0 | 0.58 | 1.3635 | -1.3147 | 2 | 13.04 | 272.3 | 2.97 | 66.0 | 2.198 | 0.73 | 0.77 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash
|
|
| T21 T21 |
|
54 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_1053
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 2 protein clashes; moderate strain Δ 22.9, geometry warning, and strain ΔE = 22.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 286.7 · logP -1.07 · TPSA 113.0
|
55.3 | 0.54 | 2.6837 | -1.5051 | 1 | 22.94 | 286.7 | -1.07 | 113.0 | 3.901 | 0.73 | 0.83 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 2 protein clashes; moderate strain Δ 22.9
|
|
| T21 T21 |
|
55 | 3 Front 3 |
Binding
Medium
Geometry
Suspicious
Data
Complete
Action
Inspect
|
TC238
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 4 protein contact clashes.
Action: Inspect the pose manually, especially around clashes, hydrogen bonds, and pocket fit.
MW 342.5 · logP 3.57 · TPSA 36.8
|
60.2 | 0.60 | 0.7298 | -0.9595 | 2 | 15.93 | 342.5 | 3.57 | 36.8 | 5.588 | 0.65 | 0.76 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 9 clashes; 4 protein contact clashes
|
|
| T21 T21 |
|
56 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49536372
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 6 protein contact clashes; moderate strain Δ 24.4, geometry warning, and strain ΔE = 24.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 278.3 · logP 3.70 · TPSA 64.9
|
55.4 | 0.56 | 1.1166 | -1.1686 | 0 | 24.35 | 278.3 | 3.70 | 64.9 | 2.114 | 0.73 | 0.70 | 0 | 0 | 0.51 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 6 protein contact clashes; moderate strain Δ 24.4
|
|
| T21 T21 |
|
57 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_MAC_40
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 9 protein contact clashes; moderate strain Δ 25.2, geometry warning, and strain ΔE = 25.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 287.7 · logP 2.10 · TPSA 101.6
|
53.2 | 0.58 | 1.3439 | -1.2983 | 0 | 25.18 | 287.7 | 2.10 | 101.6 | 2.452 | 0.63 | 0.78 | 0 | 0 | 0.50 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 10 clashes; 9 protein contact clashes; moderate strain Δ 25.2
|
|
| T21 T21 |
|
58 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z28270217
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 3 protein contact clashes; moderate strain Δ 20.2, geometry warning, and strain ΔE = 20.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 376.9 · logP 3.88 · TPSA 43.8
|
53.1 | 0.60 | 0.8104 | -1.0257 | 3 | 20.21 | 376.9 | 3.88 | 43.8 | 1.993 | 0.65 | 0.67 | 0 | 0 | 0.80 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 3 protein contact clashes; moderate strain Δ 20.2
|
|
| T21 T21 |
|
59 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56347248
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 2 protein clashes; moderate strain Δ 23.3, geometry warning, and strain ΔE = 23.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 297.7 · logP -0.35 · TPSA 118.4
|
52.4 | 0.52 | 2.4811 | -1.4929 | 0 | 23.33 | 297.7 | -0.35 | 118.4 | 3.212 | 0.73 | 0.57 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 2 protein clashes; moderate strain Δ 23.3
|
|
| T21 T21 |
|
60 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56778355
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 5 protein contact clashes; moderate strain Δ 20.3, geometry warning, and strain ΔE = 20.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 309.4 · logP 4.25 · TPSA 51.5
|
52.0 | 0.61 | 0.5454 | -1.1295 | 4 | 20.27 | 309.4 | 4.25 | 51.5 | 2.084 | 0.73 | 0.63 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 5 protein contact clashes; moderate strain Δ 20.3
|
|
| T21 T21 |
|
61 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56849319
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 266.3 · logP 2.73 · TPSA 67.5
|
51.7 | 0.39 | 3.0870 | -1.2007 | 1 | 12.96 | 266.3 | 2.73 | 67.5 | 1.934 | 0.73 | 0.69 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 2 protein clashes
|
|
| T21 T21 |
|
62 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1521553711
well-buried hydrophobics
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 22.2, geometry warning, and strain ΔE = 22.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 306.8 · logP 1.71 · TPSA 77.3
|
51.5 | 0.58 | 1.7060 | -1.4267 | 0 | 22.18 | 306.8 | 1.71 | 77.3 | 3.937 | 0.70 | 0.59 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 22.2
|
|
| T21 T21 |
|
63 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TbNat_18
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 270.2 · logP 2.58 · TPSA 90.9
|
51.8 | 0.37 | 3.6208 | -1.3316 | 0 | 17.25 | 270.2 | 2.58 | 90.9 | 2.297 | 0.70 | 0.80 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 3 protein clashes
|
|
| T21 T21 |
|
64 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TB2021_14
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 1 protein clash, geometry warning, and strain ΔE = 19.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 329.2 · logP 0.26 · TPSA 105.9
|
53.8 | 0.53 | 1.6679 | -1.2614 | 0 | 19.70 | 329.2 | 0.26 | 105.9 | 4.160 | 0.73 | 0.75 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 1 protein clash
|
|
| T21 T21 |
|
65 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_339
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 2 protein clashes; high strain Δ 37.2, geometry warning, and strain ΔE = 37.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 304.7 · logP -2.11 · TPSA 144.2
|
51.8 | 0.67 | 2.6827 | -1.9733 | 3 | 37.21 | 304.7 | -2.11 | 144.2 | 4.016 | 0.60 | 0.86 | 0 | 0 | 0.42 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 2 protein clashes; high strain Δ 37.2
|
|
| T21 T21 |
|
66 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56831546
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 381.3 · logP 3.67 · TPSA 40.9
|
50.1 | 0.46 | 2.1857 | -1.0413 | 1 | 13.97 | 381.3 | 3.67 | 40.9 | 2.385 | 0.62 | 0.60 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash
|
|
| T21 T21 |
|
67 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56174559
native-like contacts, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 3 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 286.3 · logP 3.07 · TPSA 74.8
|
49.6 | 0.54 | 1.4046 | -1.2151 | 8 | 13.65 | 286.3 | 3.07 | 74.8 | 2.355 | 0.76 | 0.84 | 0 | 0 | 0.66 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 1 protein clash
|
|
| T21 T21 |
|
68 | 3 Front 3 |
Binding
Medium
Geometry
Suspicious
Data
Complete
Action
Inspect
|
TC455
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 5 protein contact clashes.
Action: Inspect the pose manually, especially around clashes, hydrogen bonds, and pocket fit.
MW 374.5 · logP 5.37 · TPSA 29.5
|
55.8 | 0.56 | 1.0334 | -0.9206 | 3 | 12.84 | 374.5 | 5.37 | 29.5 | 5.262 | 0.46 | 0.79 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 10 clashes; 5 protein contact clashes
|
|
| T21 T21 |
|
69 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56785135
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 3 protein clashes; moderate strain Δ 21.6, geometry warning, and strain ΔE = 21.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 272.3 · logP 2.25 · TPSA 73.1
|
48.6 | 0.37 | 3.3118 | -1.2395 | 3 | 21.60 | 272.3 | 2.25 | 73.1 | 2.628 | 0.76 | 0.81 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 3 protein clashes; moderate strain Δ 21.6
|
|
| T21 T21 |
|
70 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56065053
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 4 protein contact clashes; moderate strain Δ 25.7, geometry warning, and strain ΔE = 25.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 347.5 · logP 2.29 · TPSA 55.8
|
48.7 | 0.65 | 0.3607 | -1.1228 | 6 | 25.66 | 347.5 | 2.29 | 55.8 | 2.167 | 0.59 | 0.77 | 0 | 0 | 0.82 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 7 clashes; 4 protein contact clashes; moderate strain Δ 25.7
|
|
| T21 T21 |
|
71 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC1_184
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 27.1, geometry warning, and strain ΔE = 27.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 311.8 · logP 1.74 · TPSA 91.1
|
46.9 | 0.41 | 3.1557 | -1.1994 | 7 | 27.12 | 311.8 | 1.74 | 91.1 | 3.449 | 0.73 | 0.91 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 27.1
|
|
| T21 T21 |
|
72 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2164
native-like contacts, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 8 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 262.3 · logP 0.67 · TPSA 69.6
|
47.4 | 0.46 | 2.5264 | -1.3135 | 7 | 14.24 | 262.3 | 0.67 | 69.6 | 2.919 | 0.76 | 0.81 | 0 | 0 | 0.84 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes
|
|
| T21 T21 |
|
73 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_ACDS_24
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 312.3 · logP 3.30 · TPSA 59.2
|
51.6 | 0.51 | 1.7575 | -1.1264 | 1 | 7.67 | 312.3 | 3.30 | 59.2 | 2.902 | 0.62 | 0.66 | 0 | 0 | 0.52 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash
|
|
| T21 T21 |
|
74 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57061994
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 8 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 292.4 · logP 1.75 · TPSA 70.6
|
46.5 | 0.57 | 1.4864 | -1.2620 | 7 | 16.23 | 292.4 | 1.75 | 70.6 | 2.759 | 0.70 | 0.68 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 8 clashes; 1 protein clash
|
|
| T21 T21 |
|
75 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC219
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 5 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 342.5 · logP 5.03 · TPSA 29.5
|
53.5 | 0.60 | 0.9298 | -1.0322 | 2 | 12.18 | 342.5 | 5.03 | 29.5 | 5.071 | 0.65 | 0.79 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 5 protein contact clashes
|
|
| T21 T21 |
|
76 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57183373
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 286.2 · logP 2.28 · TPSA 111.1
|
50.5 | 0.46 | 2.9914 | -1.3526 | 3 | 11.05 | 286.2 | 2.28 | 111.1 | 2.375 | 0.66 | 0.74 | 0 | 0 | 0.55 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T21 T21 |
|
77 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z46032413
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 10 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 338.8 · logP 4.44 · TPSA 55.1
|
47.2 | 0.37 | 3.2655 | -1.1029 | 6 | 10.92 | 338.8 | 4.44 | 55.1 | 2.113 | 0.73 | 0.82 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes
|
|
| T21 T21 |
|
78 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC49
native-like contacts, clean safety profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 6 clashes; 2 protein clashes.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 328.5 · logP 3.92 · TPSA 40.5
|
51.6 | 0.50 | 1.8826 | -1.0459 | 10 | 12.03 | 328.5 | 3.92 | 40.5 | 4.537 | 0.76 | 0.70 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 6 clashes; 2 protein clashes
|
|
| T21 T21 |
|
79 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC493
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 1 protein clash.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 441.7 · logP 4.73 · TPSA 41.9
|
51.8 | 0.45 | 2.3604 | -0.8927 | 3 | 14.05 | 441.7 | 4.73 | 41.9 | 5.106 | 0.46 | 0.72 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 13 clashes; 1 protein clash
|
|
| T21 T21 |
|
80 | 3 Front 3 |
Binding
Medium
Geometry
Suspicious
Data
Complete
Action
Inspect
|
TC454
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 5 protein contact clashes.
Action: Inspect the pose manually, especially around clashes, hydrogen bonds, and pocket fit.
MW 381.6 · logP 5.31 · TPSA 53.2
|
52.5 | 0.57 | 1.0619 | -0.9147 | 4 | 12.60 | 381.6 | 5.31 | 53.2 | 5.280 | 0.35 | 0.76 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 10 clashes; 5 protein contact clashes
|
|
| T21 T21 |
|
81 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z46041664
native-like contacts, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 11 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 276.3 · logP 3.70 · TPSA 42.9
|
46.4 | 0.43 | 2.9199 | -1.1709 | 8 | 9.17 | 276.3 | 3.70 | 42.9 | 2.468 | 0.76 | 0.68 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes
|
|
| T21 T21 |
|
82 | 3 Front 3 |
Binding
Medium
Geometry
Suspicious
Data
Complete
Action
Inspect
|
TC546
native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 10 clashes; 5 protein contact clashes.
Action: Inspect the pose manually, especially around clashes, hydrogen bonds, and pocket fit.
MW 370.6 · logP 5.81 · TPSA 29.5
|
52.5 | 0.58 | 1.0246 | -0.9459 | 6 | 13.19 | 370.6 | 5.81 | 29.5 | 5.156 | 0.43 | 0.79 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 10 clashes; 5 protein contact clashes
|
|
| T21 T21 |
|
83 | 3 Front 3 |
Binding
Medium
Geometry
Suspicious
Data
Complete
Action
Inspect
|
OHD_TbNat_62
native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 8 clashes; 3 protein contact clashes.
Action: Inspect the pose manually, especially around clashes, hydrogen bonds, and pocket fit.
MW 380.6 · logP 7.00 · TPSA 20.2
|
44.7 | 0.60 | 0.4808 | -0.9717 | 12 | 14.52 | 380.6 | 7.00 | 20.2 | 4.642 | 0.43 | 0.69 | 0 | 0 | 0.52 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 8 clashes; 3 protein contact clashes
|
|
| T21 T21 |
|
84 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1501480416
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 4 protein clashes; moderate strain Δ 22.4, geometry warning, and strain ΔE = 22.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 295.7 · logP 0.13 · TPSA 118.7
|
47.3 | 0.33 | 4.1225 | -1.4281 | 0 | 22.37 | 295.7 | 0.13 | 118.7 | 3.175 | 0.73 | 0.57 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 4 protein clashes; moderate strain Δ 22.4
|
|
| T21 T21 |
|
85 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_224
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 1 clash; 3 protein clashes; high strain Δ 97.7 and strain ΔE = 97.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 236.1 · logP -2.38 · TPSA 162.9
|
54.8 | 0.62 | 3.0589 | -2.1255 | 3 | 97.70 | 236.1 | -2.38 | 162.9 | 4.196 | 0.60 | 0.78 | 0 | 0 | 0.30 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 1 clash; 3 protein clashes; high strain Δ 97.7
|
|
| T21 T21 |
|
86 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45636695
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 2 protein clashes; moderate strain Δ 21.6, geometry warning, and strain ΔE = 21.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 215.2 · logP 0.76 · TPSA 83.5
|
55.5 | 0.55 | 2.4663 | -1.7705 | 1 | 21.56 | 215.2 | 0.76 | 83.5 | 1.577 | 0.73 | 0.82 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 2 protein clashes; moderate strain Δ 21.6
|
|
| T21 T21 |
|
87 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
CKP-35
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 241.3 · logP 1.91 · TPSA 59.5
|
53.9 | 0.50 | 2.3410 | -1.3869 | 1 | 9.99 | 241.3 | 1.91 | 59.5 | 3.216 | 0.73 | 0.80 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes
|
|
| T21 T21 |
|
88 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1530425068
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 224.2 · logP -0.71 · TPSA 84.3
|
52.9 | 0.53 | 2.2554 | -1.5613 | 2 | 12.41 | 224.2 | -0.71 | 84.3 | 3.582 | 0.73 | 0.80 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 2 protein clashes
|
|
| T21 T21 |
|
89 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56827687
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 7 protein contact clashes; moderate strain Δ 24.5, geometry warning, and strain ΔE = 24.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 319.4 · logP 2.91 · TPSA 74.7
|
53.8 | 0.55 | 1.0491 | -1.0901 | 2 | 24.46 | 319.4 | 2.91 | 74.7 | 1.898 | 0.65 | 0.83 | 0 | 0 | 0.92 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 7 protein contact clashes; moderate strain Δ 24.5
|
|
| T21 T21 |
|
90 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC250
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 297.3 · logP 1.72 · TPSA 83.0
|
52.2 | 0.46 | 2.1976 | -1.1258 | 2 | 11.34 | 297.3 | 1.72 | 83.0 | 2.811 | 0.73 | 0.74 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes
|
|
| T21 T21 |
|
91 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z276636956
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 6 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 312.3 · logP 2.04 · TPSA 94.7
|
53.2 | 0.58 | 1.0288 | -1.1056 | 2 | 12.20 | 312.3 | 2.04 | 94.7 | 2.850 | 0.62 | 0.74 | 0 | 0 | 0.84 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 6 protein contact clashes
|
|
| T21 T21 |
|
92 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_335
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 23.5, geometry warning, and strain ΔE = 23.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 300.3 · logP 0.85 · TPSA 89.8
|
51.1 | 0.52 | 1.9354 | -1.1586 | 5 | 23.53 | 300.3 | 0.85 | 89.8 | 2.174 | 0.73 | 0.76 | 0 | 0 | 0.80 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 23.5
|
|
| T21 T21 |
|
93 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56786752
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 269.2 · logP -1.00 · TPSA 119.3
|
50.7 | 0.37 | 3.5785 | -1.2914 | 1 | 14.56 | 269.2 | -1.00 | 119.3 | 3.794 | 0.73 | 0.84 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 3 protein clashes
|
|
| T21 T21 |
|
94 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z44355105
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 344.4 · logP 3.20 · TPSA 62.7
|
49.9 | 0.50 | 1.9714 | -1.0713 | 2 | 13.74 | 344.4 | 3.20 | 62.7 | 2.304 | 0.59 | 0.73 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T21 T21 |
|
95 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1589255958
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 4 clashes; 1 protein clash; high strain Δ 32.2 and strain ΔE = 32.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 342.3 · logP -5.40 · TPSA 189.5
|
49.4 | 0.47 | 2.4159 | -1.1538 | 7 | 32.24 | 342.3 | -5.40 | 189.5 | 4.478 | 0.53 | 0.81 | 0 | 0 | 0.24 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 4 clashes; 1 protein clash; high strain Δ 32.2
|
|
| T21 T21 |
|
96 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57904357
reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 5 clashes; 1 protein clash; high strain Δ 33.4, geometry warning, and strain ΔE = 33.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 354.2 · logP 2.99 · TPSA 74.6
|
48.6 | 0.58 | 1.4854 | -1.2025 | 6 | 33.36 | 354.2 | 2.99 | 74.6 | 2.384 | 0.65 | 0.61 | 0 | 0 | 0.66 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 1 protein clash; high strain Δ 33.4
|
|
| T21 T21 |
|
97 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_3174
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 26.2, geometry warning, and strain ΔE = 26.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 261.7 · logP 1.15 · TPSA 94.5
|
48.1 | 0.37 | 3.6818 | -1.3716 | 0 | 26.20 | 261.7 | 1.15 | 94.5 | 2.653 | 0.63 | 0.82 | 0 | 0 | 0.53 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 26.2
|
|
| T21 T21 |
|
98 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z2301684603
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 349.5 · logP 5.40 · TPSA 33.1
|
51.6 | 0.54 | 1.5263 | -1.0206 | 2 | 13.50 | 349.5 | 5.40 | 33.1 | 4.095 | 0.65 | 0.71 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash
|
|
| T21 T21 |
|
99 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_MAC_78
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 10 protein contact clashes; high strain Δ 35.1, geometry warning, and strain ΔE = 35.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 283.3 · logP 1.46 · TPSA 110.9
|
51.0 | 0.54 | 1.6176 | -1.2413 | 0 | 35.11 | 283.3 | 1.46 | 110.9 | 2.348 | 0.63 | 0.76 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 10 clashes; 10 protein contact clashes; high strain Δ 35.1
|
|
| T21 T21 |
|
100 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_374
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 2 clashes; 2 protein clashes; moderate strain Δ 21.0, geometry warning, and strain ΔE = 21.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 267.2 · logP -1.59 · TPSA 131.5
|
49.2 | 0.45 | 3.0795 | -1.4442 | 0 | 20.97 | 267.2 | -1.59 | 131.5 | 4.084 | 0.66 | 0.65 | 0 | 0 | 0.45 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 2 clashes; 2 protein clashes; moderate strain Δ 21.0
|
|
| T21 T21 |
|
101 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1741982024
56% of hydrophobic surface appears solvent-exposed (5/9 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 263.2 · logP -1.29 · TPSA 110.6
|
47.6 | 0.50 | 2.3493 | -1.3698 | 5 | 14.09 | 263.2 | -1.29 | 110.6 | 3.863 | 0.73 | 0.63 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T21 T21 |
|
102 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z28269851
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 16 clashes; 6 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 332.4 · logP 3.51 · TPSA 43.8
|
49.2 | 0.49 | 1.7686 | -0.9804 | 5 | 14.80 | 332.4 | 3.51 | 43.8 | 1.776 | 0.62 | 0.77 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 16 clashes; 6 protein contact clashes
|
|
| T21 T21 |
|
103 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TbNat_49
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 2 clashes; 1 protein clash; moderate strain Δ 28.4 and strain ΔE = 28.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 418.5 · logP 2.19 · TPSA 110.1
|
45.9 | 0.38 | 2.2505 | -0.8031 | 9 | 28.37 | 418.5 | 2.19 | 110.1 | 5.250 | 0.66 | 0.79 | 0 | 0 | 0.39 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 2 clashes; 1 protein clash; moderate strain Δ 28.4
|
|
| T21 T21 |
|
104 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_466
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 319.4 · logP 2.43 · TPSA 46.0
|
45.7 | 0.40 | 2.8376 | -1.1017 | 1 | 13.03 | 319.4 | 2.43 | 46.0 | 4.228 | 0.62 | 0.58 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes
|
|
| T21 T21 |
|
105 | 4 Front 4 |
Binding
Medium
Geometry
Suspicious
Data
Complete
Action
Inspect
|
TC458
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 5 protein contact clashes and strain ΔE = 20.0 kcal/mol.
Action: Inspect the pose manually, especially around clashes, hydrogen bonds, and pocket fit.
MW 453.6 · logP 4.18 · TPSA 80.4
|
53.0 | 0.56 | 1.0917 | -0.8830 | 4 | 19.98 | 453.6 | 4.18 | 80.4 | 5.318 | 0.51 | 0.70 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 10 clashes; 5 protein contact clashes
|
|
| T21 T21 |
|
106 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45690049
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 3 protein clashes; moderate strain Δ 23.7, geometry warning, and strain ΔE = 23.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 291.3 · logP 2.50 · TPSA 74.8
|
47.2 | 0.29 | 3.8166 | -1.2210 | 0 | 23.69 | 291.3 | 2.50 | 74.8 | 2.276 | 0.73 | 0.70 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes; moderate strain Δ 23.7
|
|
| T21 T21 |
|
107 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_154
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 395.5 · logP 2.77 · TPSA 81.5
|
44.7 | 0.33 | 3.2915 | -0.9211 | 3 | 10.65 | 395.5 | 2.77 | 81.5 | 2.770 | 0.62 | 0.65 | 0 | 0 | 0.80 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes
|
|
| T21 T21 |
|
108 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC60
native-like contacts, clean safety profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 6 clashes; 2 protein clashes.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 326.5 · logP 4.13 · TPSA 37.3
|
50.7 | 0.48 | 2.0441 | -1.0489 | 10 | 17.58 | 326.5 | 4.13 | 37.3 | 4.471 | 0.76 | 0.70 | 0 | 0 | 0.45 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 6 clashes; 2 protein clashes
|
|
| T21 T21 |
|
109 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56773008
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 10 clashes; 6 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 340.4 · logP 4.07 · TPSA 69.3
|
45.8 | 0.58 | 1.0528 | -1.0877 | 9 | 12.34 | 340.4 | 4.07 | 69.3 | 2.377 | 0.62 | 0.71 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 6 protein contact clashes
|
|
| T21 T21 |
|
110 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC545
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 8 clashes; 1 protein clash.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 372.6 · logP 5.89 · TPSA 29.5
|
50.6 | 0.51 | 1.6493 | -0.9443 | 6 | 13.93 | 372.6 | 5.89 | 29.5 | 4.954 | 0.43 | 0.76 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 8 clashes; 1 protein clash
|
|
| T21 T21 |
|
111 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC48
native-like contacts, clean safety profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 6 clashes; 2 protein clashes.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 342.5 · logP 4.57 · TPSA 29.5
|
49.6 | 0.47 | 1.9483 | -0.9774 | 11 | 14.18 | 342.5 | 4.57 | 29.5 | 4.575 | 0.76 | 0.70 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 6 clashes; 2 protein clashes
|
|
| T21 T21 |
|
112 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC237
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 10 clashes; 1 protein clash.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 368.6 · logP 5.58 · TPSA 29.5
|
49.1 | 0.46 | 1.8946 | -0.9248 | 6 | 13.68 | 368.6 | 5.58 | 29.5 | 5.294 | 0.46 | 0.79 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 10 clashes; 1 protein clash
|
|
| T21 T21 |
|
113 | 4 Front 4 |
Binding
Medium
Geometry
Suspicious
Data
Complete
Action
Inspect
|
TC438
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 5 protein contact clashes.
Action: Inspect the pose manually, especially around clashes, hydrogen bonds, and pocket fit.
MW 391.0 · logP 5.63 · TPSA 29.5
|
48.5 | 0.56 | 1.0391 | -0.9322 | 3 | 13.82 | 391.0 | 5.63 | 29.5 | 5.235 | 0.18 | 0.79 | 0 | 0 | 0.46 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, geometry warning; 10 clashes; 5 protein contact clashes
|
|
| T21 T21 |
|
114 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_409
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 18 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 363.5 · logP 3.80 · TPSA 32.7
|
39.3 | 0.35 | 3.0155 | -0.9100 | 8 | 14.64 | 363.5 | 3.80 | 32.7 | 4.174 | 0.65 | 0.68 | 0 | 0 | 0.90 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 18 clashes; 1 protein clash
|
|
| T21 T21 |
|
115 | 4 Front 4 |
Binding
Medium
Geometry
Suspicious
Data
Complete
Action
Inspect
|
TC554
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 10 clashes; 5 protein contact clashes and strain ΔE = 18.4 kcal/mol.
Action: Inspect the pose manually, especially around clashes, hydrogen bonds, and pocket fit.
MW 428.7 · logP 4.32 · TPSA 33.9
|
45.1 | 0.49 | 1.1842 | -0.7864 | 9 | 18.38 | 428.7 | 4.32 | 33.9 | 5.826 | 0.46 | 0.74 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 10 clashes; 5 protein contact clashes
|
|
| T21 T21 |
|
116 | 4 Front 4 |
Binding
Medium
Geometry
Suspicious
Data
Complete
Action
Inspect
|
OHD_TbNat_123
native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 3 protein contact clashes and strain ΔE = 19.4 kcal/mol.
Action: Inspect the pose manually, especially around clashes, hydrogen bonds, and pocket fit.
MW 414.7 · logP 8.02 · TPSA 20.2
|
38.3 | 0.56 | 0.5931 | -0.8055 | 17 | 19.43 | 414.7 | 8.02 | 20.2 | 4.388 | 0.40 | 0.69 | 0 | 0 | 0.44 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 7 clashes; 3 protein contact clashes
|
|
| T21 T21 |
|
117 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56808872
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 8 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 342.4 · logP 3.42 · TPSA 104.9
|
50.7 | 0.55 | 1.1695 | -1.0039 | 3 | 11.73 | 342.4 | 3.42 | 104.9 | 2.862 | 0.62 | 0.70 | 0 | 0 | 0.85 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 8 protein contact clashes
|
|
| T21 T21 |
|
118 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56831105
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 24.6, geometry warning, and strain ΔE = 24.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 330.8 · logP 4.40 · TPSA 59.1
|
50.4 | 0.51 | 1.7882 | -1.1183 | 2 | 24.64 | 330.8 | 4.40 | 59.1 | 2.683 | 0.62 | 0.70 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 24.6
|
|
| T21 T21 |
|
119 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45956743
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 277.3 · logP 4.12 · TPSA 42.4
|
51.1 | 0.47 | 2.0119 | -1.1424 | 1 | 16.42 | 277.3 | 4.12 | 42.4 | 2.124 | 0.73 | 0.55 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash
|
|
| T21 T21 |
|
120 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC287
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 234.3 · logP 0.39 · TPSA 97.2
|
52.1 | 0.47 | 3.2946 | -1.6957 | 2 | 15.09 | 234.3 | 0.39 | 97.2 | 2.497 | 0.73 | 0.83 | 0 | 0 | 0.71 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 3 protein clashes
|
|
| T21 T21 |
|
121 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TbNat_81
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 314.3 · logP 2.89 · TPSA 89.1
|
51.3 | 0.47 | 1.8735 | -1.0572 | 2 | 18.21 | 314.3 | 2.89 | 89.1 | 2.276 | 0.70 | 0.71 | 0 | 0 | 0.77 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash
|
|
| T21 T21 |
|
122 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56872897
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash; high strain Δ 55.0, geometry warning, and strain ΔE = 55.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 328.3 · logP 0.68 · TPSA 162.9
|
48.6 | 0.48 | 2.3993 | -1.2812 | 1 | 55.01 | 328.3 | 0.68 | 162.9 | 2.646 | 0.60 | 0.83 | 0 | 0 | 0.47 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; high strain Δ 55.0
|
|
| T21 T21 |
|
123 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC1_151
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 393.8 · logP 1.81 · TPSA 100.6
|
49.2 | 0.38 | 2.5848 | -0.9073 | 1 | 17.87 | 393.8 | 1.81 | 100.6 | 3.681 | 0.70 | 0.79 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash
|
|
| T21 T21 |
|
124 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1546610488
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 242.2 · logP -1.51 · TPSA 104.5
|
51.4 | 0.51 | 2.2779 | -1.5172 | 2 | 17.75 | 242.2 | -1.51 | 104.5 | 3.376 | 0.73 | 0.80 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T21 T21 |
|
125 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57281539
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 300.7 · logP 4.12 · TPSA 69.1
|
48.5 | 0.41 | 3.2020 | -1.2697 | 1 | 17.86 | 300.7 | 4.12 | 69.1 | 2.330 | 0.62 | 0.65 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes
|
|
| T21 T21 |
|
126 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_122
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 385.5 · logP 4.49 · TPSA 51.3
|
45.8 | 0.37 | 2.7020 | -0.9070 | 1 | 11.77 | 385.5 | 4.49 | 51.3 | 2.295 | 0.43 | 0.77 | 0 | 0 | 0.52 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 1 protein clash
|
|
| T21 T21 |
|
127 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56765438
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 324.3 · logP 3.45 · TPSA 87.6
|
45.7 | 0.48 | 1.9005 | -1.0206 | 6 | 18.68 | 324.3 | 3.45 | 87.6 | 2.842 | 0.58 | 0.73 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash
|
|
| T21 T21 |
|
128 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1515385077
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 8 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 293.4 · logP 2.93 · TPSA 78.3
|
43.7 | 0.36 | 3.0453 | -1.0918 | 7 | 12.18 | 293.4 | 2.93 | 78.3 | 2.878 | 0.73 | 0.74 | 0 | 0 | 0.87 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes
|
|
| T21 T21 |
|
129 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2179
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 23.6, geometry warning, and strain ΔE = 23.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 294.4 · logP 0.67 · TPSA 92.9
|
45.6 | 0.51 | 1.8022 | -1.1720 | 8 | 23.62 | 294.4 | 0.67 | 92.9 | 2.882 | 0.70 | 0.77 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 23.6
|
|
| T21 T21 |
|
130 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_ACDS_29
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 326.4 · logP 2.77 · TPSA 106.8
|
49.3 | 0.48 | 2.5572 | -1.2201 | 2 | 7.09 | 326.4 | 2.77 | 106.8 | 3.078 | 0.58 | 0.67 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes
|
|
| T21 T21 |
|
131 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0555
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes; high strain Δ 41.3, geometry warning, and strain ΔE = 41.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 296.3 · logP -0.68 · TPSA 170.0
|
45.6 | 0.43 | 2.6396 | -1.2160 | 0 | 41.33 | 296.3 | -0.68 | 170.0 | 2.520 | 0.53 | 0.76 | 0 | 0 | 0.47 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 7 clashes; 2 protein clashes; high strain Δ 41.3
|
|
| T21 T21 |
|
132 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z31213062
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 3 protein clashes; moderate strain Δ 28.1, geometry warning, and strain ΔE = 28.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 352.5 · logP 3.21 · TPSA 52.5
|
45.2 | 0.23 | 4.6410 | -1.0924 | 0 | 28.15 | 352.5 | 3.21 | 52.5 | 2.282 | 0.62 | 0.77 | 0 | 0 | 0.77 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 3 protein clashes; moderate strain Δ 28.1
|
|
| T21 T21 |
|
133 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK214
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 409.5 · logP 3.80 · TPSA 100.6
|
44.7 | 0.38 | 2.8685 | -0.9532 | 4 | 17.04 | 409.5 | 3.80 | 100.6 | 3.606 | 0.66 | 0.71 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash
|
|
| T21 T21 |
|
134 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_1030
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash; high strain Δ 45.7, geometry warning, and strain ΔE = 45.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 270.2 · logP -2.77 · TPSA 144.2
|
47.3 | 0.56 | 1.7890 | -1.4338 | 3 | 45.72 | 270.2 | -2.77 | 144.2 | 4.022 | 0.60 | 0.84 | 0 | 0 | 0.39 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; high strain Δ 45.7
|
|
| T21 T21 |
|
135 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TbNat_162
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 342.3 · logP 2.90 · TPSA 77.4
|
44.0 | 0.43 | 2.2565 | -1.0127 | 7 | 14.65 | 342.3 | 2.90 | 77.4 | 3.810 | 0.73 | 0.71 | 0 | 0 | 0.82 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash
|
|
| T21 T21 |
|
136 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_64
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 14 clashes; 6 protein contact clashes, geometry warning, and strain ΔE = 20.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 419.5 · logP 1.71 · TPSA 78.5
|
44.8 | 0.44 | 1.7604 | -0.8040 | 7 | 19.99 | 419.5 | 1.71 | 78.5 | 3.151 | 0.70 | 0.75 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 6 protein contact clashes
|
|
| T21 T21 |
|
137 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z30879420
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 15 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 348.4 · logP 3.21 · TPSA 64.0
|
45.7 | 0.31 | 3.1788 | -0.9342 | 1 | 10.62 | 348.4 | 3.21 | 64.0 | 1.988 | 0.62 | 0.61 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 2 protein clashes
|
|
| T21 T21 |
|
138 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56774766
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 25.4, geometry warning, and strain ΔE = 25.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 356.5 · logP 3.86 · TPSA 43.8
|
44.6 | 0.37 | 3.2377 | -1.0070 | 3 | 25.38 | 356.5 | 3.86 | 43.8 | 2.200 | 0.59 | 0.69 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 25.4
|
|
| T21 T21 |
|
139 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z30932461
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 358.4 · logP 1.37 · TPSA 119.5
|
42.2 | 0.14 | 5.2180 | -0.9891 | 2 | 15.13 | 358.4 | 1.37 | 119.5 | 1.955 | 0.70 | 0.63 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 3 protein clashes
|
|
| T21 T21 |
|
140 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_338
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 3 protein clashes; moderate strain Δ 27.9, geometry warning, and strain ΔE = 27.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 274.7 · logP -1.47 · TPSA 124.0
|
49.6 | 0.50 | 2.8594 | -1.5396 | 2 | 27.90 | 274.7 | -1.47 | 124.0 | 3.816 | 0.66 | 0.78 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 3 protein clashes; moderate strain Δ 27.9
|
|
| T21 T21 |
|
141 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z46041679
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 15 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 366.4 · logP 4.34 · TPSA 76.0
|
43.1 | 0.41 | 2.5128 | -0.8925 | 7 | 15.70 | 366.4 | 4.34 | 76.0 | 2.408 | 0.54 | 0.72 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 1 protein clash
|
|
| T21 T21 |
|
142 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC439
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 20.3 and strain ΔE = 20.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 460.7 · logP 5.30 · TPSA 55.8
|
42.6 | 0.38 | 2.2406 | -0.7890 | 7 | 20.29 | 460.7 | 5.30 | 55.8 | 5.224 | 0.40 | 0.70 | 0 | 0 | 0.46 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 20.3
|
|
| T21 T21 |
|
143 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TbNat_63
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 8 clashes; 1 protein clash.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 396.6 · logP 6.26 · TPSA 37.3
|
41.0 | 0.46 | 1.9447 | -0.9951 | 12 | 16.88 | 396.6 | 6.26 | 37.3 | 4.624 | 0.43 | 0.75 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 8 clashes; 1 protein clash
|
|
| T21 T21 |
|
144 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_428
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 1 protein clash and strain ΔE = 19.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 414.7 · logP 8.02 · TPSA 20.2
|
37.6 | 0.47 | 1.4481 | -0.8233 | 15 | 19.60 | 414.7 | 8.02 | 20.2 | 4.388 | 0.40 | 0.70 | 0 | 0 | 0.44 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 7 clashes; 1 protein clash
|
|
| T21 T21 |
|
145 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1274773112
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 205.2 · logP 0.52 · TPSA 92.0
|
53.2 | 0.46 | 3.2238 | -1.6855 | 1 | 16.26 | 205.2 | 0.52 | 92.0 | 2.641 | 0.73 | 0.87 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 3 protein clashes
|
|
| T21 T21 |
|
146 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57009636
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 315.3 · logP 1.60 · TPSA 88.0
|
50.8 | 0.42 | 2.3970 | -1.0888 | 2 | 15.68 | 315.3 | 1.60 | 88.0 | 2.587 | 0.73 | 0.79 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T21 T21 |
|
147 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z31233831
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 29.8, geometry warning, and strain ΔE = 29.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 362.5 · logP 2.61 · TPSA 98.0
|
47.6 | 0.43 | 2.5837 | -1.0438 | 3 | 29.82 | 362.5 | 2.61 | 98.0 | 2.249 | 0.58 | 0.77 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 29.8
|
|
| T21 T21 |
|
148 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z133716394
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 3 protein clashes; moderate strain Δ 20.6, geometry warning, and strain ΔE = 20.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 374.9 · logP 1.81 · TPSA 97.5
|
48.1 | 0.30 | 4.1409 | -1.1920 | 2 | 20.61 | 374.9 | 1.81 | 97.5 | 1.870 | 0.73 | 0.79 | 0 | 0 | 0.86 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes; moderate strain Δ 20.6
|
|
| T21 T21 |
|
149 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_125
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 1 protein clash; moderate strain Δ 27.9, geometry warning, and strain ΔE = 27.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 395.5 · logP 4.29 · TPSA 83.0
|
45.5 | 0.46 | 2.3234 | -0.9888 | 2 | 27.86 | 395.5 | 4.29 | 83.0 | 2.620 | 0.40 | 0.71 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 1 protein clash; moderate strain Δ 27.9
|
|
| T21 T21 |
|
150 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z237576524
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 21.1, geometry warning, and strain ΔE = 21.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 325.4 · logP 3.64 · TPSA 49.2
|
46.1 | 0.43 | 2.6394 | -1.1623 | 1 | 21.10 | 325.4 | 3.64 | 49.2 | 2.771 | 0.62 | 0.50 | 0 | 0 | 0.80 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 21.1
|
|
| T21 T21 |
|
151 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC1_171
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 307.3 · logP 2.41 · TPSA 94.8
|
48.0 | 0.42 | 2.4427 | -1.1068 | 2 | 12.43 | 307.3 | 2.41 | 94.8 | 2.193 | 0.58 | 0.75 | 0 | 0 | 0.51 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash
|
|
| T21 T21 |
|
152 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0569
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes, geometry warning, and strain ΔE = 19.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 324.3 · logP 0.23 · TPSA 141.2
|
46.7 | 0.35 | 3.4069 | -1.1309 | 2 | 19.76 | 324.3 | 0.23 | 141.2 | 2.403 | 0.60 | 0.77 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes
|
|
| T21 T21 |
|
153 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC270
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 281.3 · logP 2.60 · TPSA 71.2
|
46.1 | 0.43 | 2.7519 | -1.2690 | 7 | 11.57 | 281.3 | 2.60 | 71.2 | 2.084 | 0.73 | 0.78 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes
|
|
| T21 T21 |
|
154 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45635483
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 24.9, geometry warning, and strain ΔE = 24.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 368.5 · logP 2.43 · TPSA 106.3
|
47.9 | 0.45 | 2.5760 | -1.1852 | 4 | 24.91 | 368.5 | 2.43 | 106.3 | 1.935 | 0.62 | 0.81 | 0 | 0 | 0.86 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 24.9
|
|
| T21 T21 |
|
155 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Babesia_59
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 10 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 370.4 · logP 3.12 · TPSA 102.5
|
44.6 | 0.43 | 2.1866 | -0.9785 | 6 | 16.65 | 370.4 | 3.12 | 102.5 | 2.148 | 0.58 | 0.74 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash
|
|
| T21 T21 |
|
156 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45956756
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes, geometry warning, and strain ΔE = 19.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 263.3 · logP 3.82 · TPSA 53.4
|
50.3 | 0.35 | 3.4157 | -1.2117 | 1 | 19.02 | 263.3 | 3.82 | 53.4 | 2.238 | 0.73 | 0.81 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes
|
|
| T21 T21 |
|
157 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1521553597
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 15 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 426.5 · logP 3.08 · TPSA 84.4
|
41.3 | 0.44 | 2.5205 | -1.0027 | 7 | 15.46 | 426.5 | 3.08 | 84.4 | 3.318 | 0.55 | 0.70 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 1 protein clash
|
|
| T21 T21 |
|
158 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56821488
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 1 protein clash; moderate strain Δ 21.8, geometry warning, and strain ΔE = 21.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 447.0 · logP 5.33 · TPSA 75.3
|
43.0 | 0.38 | 2.7895 | -0.9572 | 1 | 21.82 | 447.0 | 5.33 | 75.3 | 2.123 | 0.28 | 0.80 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 1 protein clash; moderate strain Δ 21.8
|
|
| T21 T21 |
|
159 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45614063
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 11 protein contact clashes; moderate strain Δ 23.7, geometry warning, and strain ΔE = 23.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 368.5 · logP 2.43 · TPSA 106.3
|
48.2 | 0.50 | 1.8318 | -1.1248 | 4 | 23.72 | 368.5 | 2.43 | 106.3 | 1.876 | 0.62 | 0.73 | 0 | 0 | 0.86 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 11 protein contact clashes; moderate strain Δ 23.7
|
|
| T21 T21 |
|
160 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC107
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash; high strain Δ 49.3, geometry warning, and strain ΔE = 49.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 353.5 · logP 3.22 · TPSA 48.5
|
44.3 | 0.51 | 1.5074 | -1.0138 | 4 | 49.34 | 353.5 | 3.22 | 48.5 | 4.586 | 0.65 | 0.71 | 0 | 0 | 0.92 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash; high strain Δ 49.3
|
|
| T21 T21 |
|
161 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_43
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 10 clashes; 7 protein contact clashes; moderate strain Δ 21.4, geometry warning, and strain ΔE = 21.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 376.5 · logP 3.93 · TPSA 56.9
|
44.3 | 0.48 | 1.3848 | -0.8768 | 7 | 21.40 | 376.5 | 3.93 | 56.9 | 2.052 | 0.62 | 0.67 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 7 protein contact clashes; moderate strain Δ 21.4
|
|
| T21 T21 |
|
162 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z238757166
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 2 protein clashes; moderate strain Δ 21.4, geometry warning, and strain ΔE = 21.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 380.5 · logP 4.30 · TPSA 60.5
|
40.7 | 0.24 | 3.9831 | -0.8883 | 2 | 21.37 | 380.5 | 4.30 | 60.5 | 2.294 | 0.43 | 0.77 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 2 protein clashes; moderate strain Δ 21.4
|
|
| T21 T21 |
|
163 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z68347496
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 25.1, geometry warning, and strain ΔE = 25.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 425.5 · logP 2.58 · TPSA 124.6
|
42.9 | 0.36 | 3.0740 | -0.9010 | 3 | 25.10 | 425.5 | 2.58 | 124.6 | 2.008 | 0.45 | 0.85 | 0 | 0 | 0.47 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 25.1
|
|
| T21 T21 |
|
164 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45359950
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 428.6 · logP 2.62 · TPSA 74.8
|
41.3 | 0.29 | 3.4606 | -0.9091 | 5 | 16.49 | 428.6 | 2.62 | 74.8 | 2.247 | 0.58 | 0.73 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T21 T21 |
|
165 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_MV-35
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 12 clashes; 6 protein contact clashes; high strain Δ 38.5, geometry warning, and strain ΔE = 38.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 385.9 · logP 0.85 · TPSA 108.3
|
40.2 | 0.49 | 1.4428 | -0.9010 | 12 | 38.52 | 385.9 | 0.85 | 108.3 | 2.936 | 0.70 | 0.78 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 6 protein contact clashes; high strain Δ 38.5
|
|
| T21 T21 |
|
166 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z108847942
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 7 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 389.5 · logP 2.80 · TPSA 90.3
|
42.0 | 0.44 | 1.9531 | -0.9206 | 8 | 18.61 | 389.5 | 2.80 | 90.3 | 2.100 | 0.62 | 0.63 | 0 | 0 | 0.80 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash
|
|
| T21 T21 |
|
167 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK155
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 410.5 · logP 4.14 · TPSA 108.8
|
41.5 | 0.40 | 2.6728 | -0.9711 | 5 | 14.04 | 410.5 | 4.14 | 108.8 | 3.506 | 0.48 | 0.74 | 0 | 0 | 0.55 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash
|
|
| T21 T21 |
|
168 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC271
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 297.3 · logP 2.30 · TPSA 91.4
|
46.1 | 0.45 | 2.3625 | -1.2009 | 7 | 12.27 | 297.3 | 2.30 | 91.4 | 2.229 | 0.70 | 0.78 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash
|
|
| T21 T21 |
|
169 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z30857987
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 6 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 352.8 · logP 1.89 · TPSA 89.3
|
38.8 | 0.24 | 4.1687 | -1.0473 | 10 | 12.05 | 352.8 | 1.89 | 89.3 | 1.746 | 0.70 | 0.82 | 0 | 0 | 0.83 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes
|
|
| T21 T21 |
|
170 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56774554
Hydrophobic burial looks adequate: 33% exposed (8/24 atoms). No penalty flagged.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 17 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 426.5 · logP 3.61 · TPSA 94.5
|
35.6 | 0.22 | 4.1438 | -0.8459 | 8 | 15.62 | 426.5 | 3.61 | 94.5 | 3.925 | 0.70 | 0.64 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 17 clashes; 2 protein clashes
|
|
| T21 T21 |
|
171 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC490
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 394.5 · logP 3.58 · TPSA 92.4
|
39.1 | 0.28 | 3.7954 | -0.9508 | 5 | 12.84 | 394.5 | 3.58 | 92.4 | 3.774 | 0.58 | 0.68 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes
|
|
| T21 T21 |
|
172 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK215
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 2 protein clashes, geometry warning, and strain ΔE = 19.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 409.5 · logP 3.80 · TPSA 100.6
|
38.5 | 0.20 | 4.1891 | -0.8418 | 5 | 19.03 | 409.5 | 3.80 | 100.6 | 3.704 | 0.66 | 0.73 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 2 protein clashes
|
|
| T21 T21 |
|
173 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK136
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 12 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 409.5 · logP 4.98 · TPSA 85.0
|
31.6 | 0.39 | 2.4915 | -0.8680 | 14 | 18.27 | 409.5 | 4.98 | 85.0 | 3.291 | 0.48 | 0.72 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash
|
|
| T21 T21 |
|
174 | 6 Front 6 |
Binding
Medium
Geometry
Suspicious
Data
Complete
Action
Inspect
|
TC486
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 15 clashes; 6 protein contact clashes; moderate strain Δ 25.6 and strain ΔE = 25.6 kcal/mol.
Action: Inspect the pose manually, especially around clashes, hydrogen bonds, and pocket fit.
MW 519.8 · logP 6.81 · TPSA 60.2
|
36.1 | 0.37 | 2.0248 | -0.6387 | 12 | 25.62 | 519.8 | 6.81 | 60.2 | 5.293 | 0.33 | 0.76 | 0 | 0 | 0.44 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 15 clashes; 6 protein contact clashes; moderate strain Δ 25.6
|
|
| T21 T21 |
|
175 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56891526
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 3 protein clashes; moderate strain Δ 20.4, geometry warning, and strain ΔE = 20.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 279.3 · logP 1.39 · TPSA 90.3
|
50.4 | 0.41 | 3.1648 | -1.3410 | 2 | 20.40 | 279.3 | 1.39 | 90.3 | 3.061 | 0.73 | 0.84 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 3 protein clashes; moderate strain Δ 20.4
|
|
| T21 T21 |
|
176 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0165
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes; high strain Δ 54.3, geometry warning, and strain ΔE = 54.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 292.3 · logP -0.22 · TPSA 127.3
|
47.3 | 0.41 | 3.4615 | -1.4394 | 1 | 54.32 | 292.3 | -0.22 | 127.3 | 3.833 | 0.70 | 0.83 | 0 | 0 | 0.51 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes; high strain Δ 54.3
|
|
| T21 T21 |
|
177 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49907521
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes, geometry warning, and strain ΔE = 19.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 325.4 · logP 3.81 · TPSA 62.5
|
47.0 | 0.34 | 3.0970 | -1.0954 | 1 | 19.76 | 325.4 | 3.81 | 62.5 | 2.497 | 0.62 | 0.80 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes
|
|
| T21 T21 |
|
178 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0563
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes; high strain Δ 36.6, geometry warning, and strain ΔE = 36.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 355.4 · logP 1.19 · TPSA 150.2
|
45.7 | 0.37 | 3.0017 | -1.1123 | 1 | 36.56 | 355.4 | 1.19 | 150.2 | 2.614 | 0.60 | 0.74 | 0 | 0 | 0.52 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes; high strain Δ 36.6
|
|
| T21 T21 |
|
179 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z286182030
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 9 clashes; 1 protein clash; high strain Δ 33.1, geometry warning, and strain ΔE = 33.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 439.7 · logP 2.69 · TPSA 106.3
|
42.8 | 0.43 | 2.5323 | -1.1631 | 6 | 33.10 | 439.7 | 2.69 | 106.3 | 2.129 | 0.62 | 0.73 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash; high strain Δ 33.1
|
|
| T21 T21 |
|
180 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_101
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 21.5, geometry warning, and strain ΔE = 21.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 389.5 · logP 2.27 · TPSA 89.7
|
40.3 | 0.27 | 3.4811 | -0.8412 | 4 | 21.52 | 389.5 | 2.27 | 89.7 | 3.687 | 0.58 | 0.75 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 21.5
|
|
| T21 T21 |
|
181 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1541815088
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash, geometry warning, and strain ΔE = 19.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 307.4 · logP 2.82 · TPSA 75.6
|
47.8 | 0.42 | 2.4008 | -1.1626 | 3 | 19.70 | 307.4 | 2.82 | 75.6 | 1.981 | 0.62 | 0.81 | 0 | 0 | 0.91 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T21 T21 |
|
182 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56857031
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 28.9, geometry warning, and strain ΔE = 28.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 304.4 · logP 2.82 · TPSA 88.1
|
42.5 | 0.44 | 2.7505 | -1.2218 | 2 | 28.85 | 304.4 | 2.82 | 88.1 | 2.235 | 0.34 | 0.78 | 0 | 0 | 0.88 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 28.9
|
|
| T21 T21 |
|
183 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z16382127
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 29.0, geometry warning, and strain ΔE = 29.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 403.5 · logP 1.21 · TPSA 106.8
|
40.2 | 0.31 | 3.3902 | -0.9143 | 8 | 28.96 | 403.5 | 1.21 | 106.8 | 2.899 | 0.66 | 0.82 | 0 | 0 | 0.50 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 29.0
|
|
| T21 T21 |
|
184 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC1_170
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes, geometry warning, and strain ΔE = 18.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 307.3 · logP 2.41 · TPSA 94.8
|
45.4 | 0.32 | 3.5443 | -1.1005 | 2 | 18.71 | 307.3 | 2.41 | 94.8 | 2.210 | 0.58 | 0.78 | 0 | 0 | 0.51 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes
|
|
| T21 T21 |
|
185 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_65
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 5 clashes; 1 protein clash; high strain Δ 47.7, geometry warning, and strain ΔE = 47.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 369.4 · logP -0.07 · TPSA 143.6
|
39.8 | 0.43 | 2.5550 | -1.0753 | 6 | 47.74 | 369.4 | -0.07 | 143.6 | 3.843 | 0.60 | 0.73 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 1 protein clash; high strain Δ 47.7
|
|
| T21 T21 |
|
186 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_3008
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 2 protein clashes; high strain Δ 32.7, geometry warning, and strain ΔE = 32.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 246.2 · logP 1.10 · TPSA 112.4
|
39.6 | 0.36 | 3.8455 | -1.4051 | 1 | 32.71 | 246.2 | 1.10 | 112.4 | 4.188 | 0.45 | 0.74 | 0 | 0 | 0.47 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 5 clashes; 2 protein clashes; high strain Δ 32.7
|
|
| T21 T21 |
|
187 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z16383985
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 14 clashes; 7 protein contact clashes; moderate strain Δ 28.1, geometry warning, and strain ΔE = 28.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 397.4 · logP 3.04 · TPSA 105.8
|
39.5 | 0.48 | 1.7166 | -0.9269 | 11 | 28.11 | 397.4 | 3.04 | 105.8 | 2.973 | 0.58 | 0.78 | 0 | 0 | 0.51 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 7 protein contact clashes; moderate strain Δ 28.1
|
|
| T21 T21 |
|
188 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_46
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 9 clashes; 1 protein clash; high strain Δ 49.1, geometry warning, and strain ΔE = 49.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 332.7 · logP 2.02 · TPSA 102.8
|
38.6 | 0.49 | 1.9295 | -1.0923 | 9 | 49.08 | 332.7 | 2.02 | 102.8 | 2.067 | 0.52 | 0.81 | 0 | 0 | 0.51 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 9 clashes; 1 protein clash; high strain Δ 49.1
|
|
| T21 T21 |
|
189 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z27682971
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 3 protein clashes; high strain Δ 32.5, geometry warning, and strain ΔE = 32.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 344.3 · logP 1.69 · TPSA 119.5
|
42.8 | 0.15 | 5.1953 | -1.0785 | 1 | 32.49 | 344.3 | 1.69 | 119.5 | 1.899 | 0.70 | 0.76 | 0 | 0 | 0.70 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 3 protein clashes; high strain Δ 32.5
|
|
| T21 T21 |
|
190 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_MAC_44
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 3 protein clashes; high strain Δ 31.7, geometry warning, and strain ΔE = 31.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 283.3 · logP 1.46 · TPSA 110.9
|
42.1 | 0.27 | 4.3868 | -1.2747 | 1 | 31.66 | 283.3 | 1.46 | 110.9 | 2.406 | 0.63 | 0.74 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 10 clashes; 3 protein clashes; high strain Δ 31.7
|
|
| T21 T21 |
|
191 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC394
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 428.5 · logP 4.30 · TPSA 108.8
|
41.2 | 0.38 | 2.9630 | -0.9892 | 5 | 13.98 | 428.5 | 4.30 | 108.8 | 3.809 | 0.48 | 0.80 | 0 | 0 | 0.53 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash
|
|
| T21 T21 |
|
192 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z44305068
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 6 clashes; 3 protein clashes, geometry warning, and strain ΔE = 19.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 400.8 · logP 3.74 · TPSA 102.4
|
34.5 | 0.24 | 4.1316 | -0.9540 | 9 | 19.60 | 400.8 | 3.74 | 102.4 | 2.336 | 0.58 | 0.67 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes
|
|
| T21 T21 |
|
193 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC457
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 12 clashes; 1 protein clash; high strain Δ 39.7 and strain ΔE = 39.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 460.7 · logP 2.27 · TPSA 74.4
|
41.0 | 0.32 | 2.9105 | -0.8098 | 7 | 39.68 | 460.7 | 2.27 | 74.4 | 5.975 | 0.55 | 0.72 | 0 | 0 | 0.46 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 12 clashes; 1 protein clash; high strain Δ 39.7
|
|
| T21 T21 |
|
194 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_3647
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 328.4 · logP 1.02 · TPSA 87.5
|
47.8 | 0.39 | 2.2808 | -1.0276 | 3 | 10.36 | 328.4 | 1.02 | 87.5 | 2.448 | 0.70 | 0.78 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash
|
|
| T21 T21 |
|
195 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49995281
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes; high strain Δ 35.4, geometry warning, and strain ΔE = 35.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 364.4 · logP 1.39 · TPSA 118.4
|
45.9 | 0.40 | 2.5843 | -0.9812 | 5 | 35.41 | 364.4 | 1.39 | 118.4 | 3.129 | 0.70 | 0.84 | 0 | 0 | 0.53 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes; high strain Δ 35.4
|
|
| T21 T21 |
|
196 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56174642
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 1 protein clash; high strain Δ 37.3, geometry warning, and strain ΔE = 37.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 329.4 · logP 3.35 · TPSA 72.2
|
44.4 | 0.34 | 3.1547 | -0.9682 | 1 | 37.34 | 329.4 | 3.35 | 72.2 | 3.675 | 0.62 | 0.70 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 1 protein clash; high strain Δ 37.3
|
|
| T21 T21 |
|
197 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z19651549
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 4 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 301.3 · logP 3.21 · TPSA 83.6
|
45.2 | 0.24 | 4.8428 | -1.3459 | 2 | 15.70 | 301.3 | 3.21 | 83.6 | 2.149 | 0.70 | 0.78 | 0 | 0 | 0.44 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 4 protein clashes
|
|
| T21 T21 |
|
198 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_626
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes; high strain Δ 31.4, geometry warning, and strain ΔE = 31.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 343.5 · logP 1.71 · TPSA 110.9
|
45.2 | 0.31 | 3.5786 | -1.1846 | 2 | 31.41 | 343.5 | 1.71 | 110.9 | 2.415 | 0.73 | 0.75 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes; high strain Δ 31.4
|
|
| T21 T21 |
|
199 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2013
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 15 clashes; 11 protein contact clashes; moderate strain Δ 24.7, geometry warning, and strain ΔE = 24.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 345.3 · logP 1.22 · TPSA 115.1
|
42.1 | 0.35 | 2.4264 | -0.9867 | 5 | 24.71 | 345.3 | 1.22 | 115.1 | 2.598 | 0.73 | 0.70 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 11 protein contact clashes; moderate strain Δ 24.7
|
|
| T21 T21 |
|
200 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
GemmaOHDUnisi_6
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash; high strain Δ 53.4, geometry warning, and strain ΔE = 53.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 404.4 · logP 3.60 · TPSA 115.6
|
44.7 | 0.37 | 2.7054 | -0.9646 | 1 | 53.43 | 404.4 | 3.60 | 115.6 | 2.351 | 0.55 | 0.80 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash; high strain Δ 53.4
|
Score composition ▼ show
Docking 28% · final rank, interaction-normalized score, raw docking score
Burial 18% · absolute exposed hydrophobic atom count (lower is better)
Strain 14% · strain delta, intra score, geometry sanity
Safety / ADMET 18% · ADMET score with hERG/AMES/DILI/bioaccumulation penalties — Pareto objective
Ecotoxicology 9% · fish/daphnia/algae LC50 classes + bioaccumulation + persistence — Pareto objective
Synthesis 10% · SA score when available, otherwise Fsp3 proxy
Native similarity 12% · contact and H-bond recall when a native reference exists
Diversity shortlist 0% · cached shortlist already includes the novelty-aware selection step
How ranking works: Pareto fronts are built from six default objectives — docking score, ligand efficiency, burial depth, strain energy, ADMET safety, and ecotoxicology (fish/daphnia/algae LC₅₀ + bioaccumulation + persistence). Front 1 contains non-dominated ligands: no other ligand beats them across all six objectives simultaneously. Inside each front, ligands are ordered by a compromise score with explicit penalties for PAINS, reactivity, toxicity alerts, geometry warnings, excluded poses, and artifact annotations. The top 200 are returned using a diversity-aware selection step.
Methodology ▼ show
1. Candidate definition. For each target we keep one best pose per ligand, so the shortlist is not inflated by many similar poses of the same compound.
2. Objective set. Each ligand is evaluated across docking quality, absolute nonpolar solvent exposure (`n_exposed`), conformational strain, native-like interaction similarity when a native reference exists, safety and ecotoxicology, synthesizability, and general developability indicators such as QED.
2a. SASA / burial source. `SASA: done` = cached FreeSASA metrics. `queued/running` = background worker scheduled. `failed` = worker failed. `missing` = no SASA cached yet.
3. Liability penalties. PAINS motifs, reactive groups, toxicity alerts, artifact annotations, geometry warnings, and excluded-pose flags reduce the compromise score and are shown explicitly.
4. Pareto ranking. Front 1 = non-dominated ligands (no other ligand is better in all objectives simultaneously). Lower front number = more balanced profile.
5. Missing SASA handling. Missing SASA lowers `Data completeness` to `Provisional` but does not automatically reject a ligand. Binding and geometry axes stay independent.
6. Compromise score. `100 × clamp(weighted positive − liability penalty − missing-data penalty)`. Weights: docking 28%, burial 18%, strain 14%, safety/ecotox 18%, synthesis 10%, native similarity 12% (when reference exists).
7. Component details. Docking = `final_rank_score` 55% + `score_inter_norm` 30% + raw `score` 15%. Strain = `strain_delta` 55% + `score_intra_norm` 30% + geometry sanity 15%.
8. Final shortlist. Top 50 per target taken front-by-front with diversity-aware selection — near-duplicate analogs do not dominate.
How to read the table. `Pareto` = non-dominated layer, `Compromise` = within-front ordering score, `n_exposed` = burial proxy (lower is better), `Strain dE` = conformational stress, colored dots = quick green/orange/red cue.
How to use selections. Mark compounds row-by-row, save to `Current`/`Temp`/`A/B/C` sets, export to SDF/XLSX/CSV, or send to downstream analysis pages.