FAIRMol

Ligand prioritization

Interactive top-50 shortlist per target built from a transparent multi-objective workflow. It combines docking quality, absolute exposed hydrophobic atoms, low strain, safety/ecotox, synthesizability, and native-contact similarity when a native reference exists, then uses Pareto fronts plus a compromise score to expose the most balanced ligands.

DB SELECTION
200 shortlisted rows 1 targets
T. brucei TR · T17
T. brucei PDB 5S9T
Protein: Trypanothione reductase
Binding site: Doorstop site
Receptor context: 2 cofactors / ions kept for scoring, 58 ligand-like HETATM excluded.
Kept context: A:FAD501, B:FAD501
Targets
1
each capped at 50 ligands
Best-pose candidates
596
one best pose per ligand per target
Synth metric
SA score
direct SA metric
Absolute burial proxy
n_exposed
absolute exposed hydrophobic atoms, not fraction
Pareto front 1
5
non-dominated ligands across all selected targets
Burial source
FreeSASA 200
Proxy 0 · Missing 0
Metrics coverage
Done 200
Pending 0 · Failed 0 · Missing 0
Diversity shortlist
Novelty 0.45
High novelty 200 · Close analogs 0
New vs legacy top 50
Added 6 · Dropped 6
Stayed 194 of 200 legacy picks
T17
Native Front 1: 5
200 / 596 shortlisted
Best: ulfkktlib_1191 · score 64.4
Pareto layers observed: 13
Metrics: done 200 · pending 0 · failed 0 · missing 0
Diversity: novelty 0.45 · close analogs 0
New vs legacy: added 6 · dropped 6 · stayed 194/200
Added: Z49547615, OHD_TbNat_74, Z17189141 · Dropped: OSA_Lib_232, Z31413736, OSA_Lib_244
Table view
Switch between a compact decision view, medicinal chemistry properties, and the full docking inspection layout.
Target 2D Rank Pareto Assessment Ligand Compromise Docking Final rank Inter norm n_exposed Strain dE MW cLogP TPSA SA score Safety Native sim PAINS Reactive QED SASA Flags
T17
T17
1 1
Front 1 (non-dominated)
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
ulfkktlib_1191
strong docking, well-buried hydrophobics, clean safety profile
Details
Why selected: Strong docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 6 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 109.1 · logP 0.37 · TPSA 51.8
64.4 0.92 -1.2723 -2.8081 1 1.02 109.1 0.37 51.8 2.878 0.76 0.47 0 0 0.52
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 3 clashes; 6 protein contact clashes
T17
T17
2 1
Front 1 (non-dominated)
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
ulfkktlib_2895
strong docking, well-buried hydrophobics, clean safety profile
Details
Why selected: Strong docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 128.2 · logP 0.43 · TPSA 48.6
63.5 0.88 -0.5951 -2.8480 0 1.59 128.2 0.43 48.6 3.060 0.76 0.47 0 0 0.50
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 3 clashes; 1 protein clash
T17
T17
3 1
Front 1 (non-dominated)
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z281786934
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 3 protein clashes.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 256.3 · logP 0.89 · TPSA 81.6
58.8 0.41 2.7138 -1.2949 0 9.38 256.3 0.89 81.6 2.287 0.70 0.58 0 0 0.59
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
geometry warning; 4 clashes; 3 protein clashes
T17
T17
4 1
Front 1 (non-dominated)
Binding Weak
Geometry Suspicious
Data Complete
Action Inspect
5S9T
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: native-like contact pattern and well-buried hydrophobics.
Main concern: Native reference ligand.
Action: Inspect the pose manually, especially around clashes, hydrogen bonds, and pocket fit.
MW 239.2 · logP 0.03 · TPSA 80.0
53.5 0.00 - - 2 - 239.2 0.03 80.0 2.992 0.73 1.00 0 0 0.74
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Native reference ligand
T17
T17
5 1
Front 1 (non-dominated)
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z2737721067
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 282.3 · logP 3.59 · TPSA 78.4
47.1 0.51 1.8618 -1.1188 4 14.34 282.3 3.59 78.4 2.360 0.70 0.18 0 0 0.69
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 9 clashes; 1 protein clash
T17
T17
6 2
Front 2
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
NMT-TY0116
well-buried hydrophobics
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 2 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 169.2 · logP -0.67 · TPSA 87.3
51.3 0.51 2.4195 -2.0176 0 7.01 169.2 -0.67 87.3 3.716 0.73 0.47 0 0 0.36
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 2 clashes; 3 protein clashes
T17
T17
7 2
Front 2
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
ulfkktlib_953
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 3 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 313.4 · logP 4.90 · TPSA 49.6
49.0 0.51 0.8166 -0.9777 4 9.70 313.4 4.90 49.6 2.323 0.62 0.58 0 0 0.53
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 10 clashes; 3 protein contact clashes
T17
T17
8 2
Front 2
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z49615771
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 24.2, geometry warning, and strain ΔE = 24.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 256.3 · logP 2.44 · TPSA 85.4
50.3 0.44 2.7041 -1.1747 1 24.24 256.3 2.44 85.4 2.378 0.73 0.48 0 0 0.45
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 24.2
T17
T17
9 2
Front 2
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_Leishmania_402
well-buried hydrophobics, native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 25.0 and strain ΔE = 25.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 468.7 · logP 6.09 · TPSA 66.8
44.3 0.32 3.5124 -0.7550 6 24.96 468.7 6.09 66.8 5.417 0.40 0.73 0 0 0.49
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 25.0
T17
T17
10 2
Front 2
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
ulfkktlib_1165
well-buried hydrophobics, clean safety profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 218.3 · logP 0.54 · TPSA 65.7
44.1 0.44 2.9342 -1.4646 3 15.51 218.3 0.54 65.7 3.570 0.76 0.12 0 0 0.79
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 7 clashes; 3 protein clashes
T17
T17
11 2
Front 2
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z56853835
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 6 protein contact clashes; high strain Δ 31.2, geometry warning, and strain ΔE = 31.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 337.9 · logP 4.99 · TPSA 42.8
43.8 0.51 0.6879 -1.0223 2 31.24 337.9 4.99 42.8 2.359 0.65 0.22 0 0 0.80
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 6 clashes; 6 protein contact clashes; high strain Δ 31.2
T17
T17
12 2
Front 2
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
ulfkktlib_215
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 4 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 314.5 · logP 2.41 · TPSA 72.5
43.4 0.51 0.6819 -0.9937 6 15.79 314.5 2.41 72.5 3.093 0.62 0.38 0 0 0.75
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 8 clashes; 4 protein contact clashes
T17
T17
13 2
Front 2
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_276
well-buried hydrophobics, clean safety profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 308.5 · logP 1.47 · TPSA 33.2
39.0 0.25 3.8605 -0.9668 0 14.89 308.5 1.47 33.2 5.143 0.76 0.25 0 0 0.86
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 3 protein clashes
T17
T17
14 2
Front 2
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_TbNat_63
41% of hydrophobic surface appears solvent-exposed (11/27 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
Details
Why selected: Some docking support and good contact coverage.
Main concern: geometry warning; 10 clashes; 1 protein clash.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 396.6 · logP 6.26 · TPSA 37.3
39.4 0.39 2.2283 -0.7845 11 16.76 396.6 6.26 37.3 4.624 0.43 0.30 0 0 0.57
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
geometry warning; 10 clashes; 1 protein clash
T17
T17
15 3
Front 3
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z21488718
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 294.3 · logP 3.30 · TPSA 75.6
50.8 0.45 1.4860 -1.0588 2 9.32 294.3 3.30 75.6 2.188 0.70 0.67 0 0 0.69
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 7 clashes; 1 protein clash
T17
T17
16 3
Front 3
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z25107081
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 292.3 · logP 2.64 · TPSA 76.2
49.3 0.47 1.6426 -1.2095 1 15.24 292.3 2.64 76.2 2.548 0.70 0.52 0 0 0.59
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 7 clashes; 1 protein clash
T17
T17
17 3
Front 3
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_TbNat_133
well-buried hydrophobics
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 6 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 344.3 · logP 2.08 · TPSA 106.2
48.4 0.48 1.0358 -0.9424 2 15.96 344.3 2.08 106.2 4.172 0.73 0.57 0 0 0.82
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 9 clashes; 6 protein contact clashes
T17
T17
18 3
Front 3
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
NMT-TY0566
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 280.3 · logP 0.02 · TPSA 150.0
48.2 0.45 1.8110 -1.1778 0 18.74 280.3 0.02 150.0 2.318 0.53 0.79 0 0 0.58
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Alerts x1, Geometry warning, geometry warning; 7 clashes; 1 protein clash
T17
T17
19 3
Front 3
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z49712358
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 1 protein clash, geometry warning, and strain ΔE = 19.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 277.3 · logP 3.78 · TPSA 57.5
48.3 0.45 2.0936 -1.0698 1 19.20 277.3 3.78 57.5 2.113 0.73 0.31 0 0 0.57
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 13 clashes; 1 protein clash
T17
T17
20 3
Front 3
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z28138665
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 7 protein contact clashes; moderate strain Δ 26.3, geometry warning, and strain ΔE = 26.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 295.3 · logP 1.92 · TPSA 81.9
48.2 0.48 1.1366 -1.0280 0 26.29 295.3 1.92 81.9 1.846 0.70 0.37 0 0 0.79
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 9 clashes; 7 protein contact clashes; moderate strain Δ 26.3
T17
T17
21 3
Front 3
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z30168606
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 5 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 304.3 · logP 3.80 · TPSA 51.2
48.1 0.48 1.2735 -1.0094 1 8.52 304.3 3.80 51.2 1.621 0.62 0.35 0 0 0.78
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 13 clashes; 5 protein contact clashes
T17
T17
22 3
Front 3
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z60744774
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 2 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 302.3 · logP 3.96 · TPSA 51.2
46.1 0.50 0.8959 -1.0040 1 14.52 302.3 3.96 51.2 2.092 0.62 0.26 0 0 0.78
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 14 clashes; 2 protein contact clashes
T17
T17
23 3
Front 3
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_TC2_35
well-buried hydrophobics
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 2 protein contact clashes; high strain Δ 30.7, geometry warning, and strain ΔE = 30.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 452.0 · logP -0.00 · TPSA 62.4
44.7 0.49 1.0018 -0.7933 2 30.68 452.0 -0.00 62.4 3.797 0.73 0.30 0 0 0.69
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 2 protein contact clashes; high strain Δ 30.7
T17
T17
24 3
Front 3
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z14345629
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 4 protein contact clashes; moderate strain Δ 24.6, geometry warning, and strain ΔE = 24.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 478.6 · logP 4.58 · TPSA 78.3
43.6 0.50 0.8883 -0.7107 3 24.59 478.6 4.58 78.3 2.771 0.25 0.75 0 0 0.37
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 7 clashes; 4 protein contact clashes; moderate strain Δ 24.6
T17
T17
25 3
Front 3
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
TC287
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 235.3 · logP -0.33 · TPSA 98.8
42.5 0.35 3.6078 -1.3222 2 16.14 235.3 -0.33 98.8 3.110 0.73 0.16 0 0 0.68
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 4 clashes; 3 protein clashes
T17
T17
26 3
Front 3
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
NMT-TY0781
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 310.3 · logP -0.53 · TPSA 116.2
41.7 0.35 3.2528 -1.0907 0 15.40 310.3 -0.53 116.2 2.366 0.67 0.21 0 0 0.74
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Alerts x1, Geometry warning, geometry warning; 10 clashes; 2 protein clashes
T17
T17
27 3
Front 3
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z45614013
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 3 protein clashes; moderate strain Δ 25.0, geometry warning, and strain ΔE = 25.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 312.4 · logP 1.13 · TPSA 106.3
42.4 0.34 3.1689 -1.1291 0 25.01 312.4 1.13 106.3 1.643 0.73 0.12 0 0 0.88
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 7 clashes; 3 protein clashes; moderate strain Δ 25.0
T17
T17
28 3
Front 3
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
KB_chagas_97
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 410.5 · logP 4.11 · TPSA 93.3
40.3 0.37 2.3945 -0.8326 0 13.84 410.5 4.11 93.3 2.418 0.36 0.37 0 0 0.53
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 1 protein clash
T17
T17
29 3
Front 3
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
ulfkktlib_1162
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 340.4 · logP 4.07 · TPSA 45.5
43.8 0.42 2.0407 -0.9036 2 6.48 340.4 4.07 45.5 2.826 0.62 0.25 0 0 0.58
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 14 clashes; 1 protein clash
T17
T17
30 3
Front 3
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
ulfkktlib_1412
well-buried hydrophobics
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 3 protein clashes; moderate strain Δ 20.3, geometry warning, and strain ΔE = 20.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 253.5 · logP 1.37 · TPSA 81.1
38.6 0.40 3.2268 -1.6165 0 20.29 253.5 1.37 81.1 3.441 0.55 0.17 0 0 0.59
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Alerts x1, Geometry warning, geometry warning; 4 clashes; 3 protein clashes; moderate strain Δ 20.3
T17
T17
31 3
Front 3
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_22
well-buried hydrophobics
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 3 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 459.3 · logP 5.21 · TPSA 16.5
36.2 0.49 0.9354 -0.7973 2 13.30 459.3 5.21 16.5 5.181 0.20 0.34 0 0 0.64
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 3 protein contact clashes
T17
T17
32 3
Front 3
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z56877149
Hydrophobic burial looks adequate: 32% exposed (8/25 atoms). No penalty flagged.
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 464.6 · logP 3.87 · TPSA 94.5
36.3 0.35 3.4129 -0.7494 8 16.78 464.6 3.87 94.5 3.659 0.47 0.41 0 0 0.62
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 2 protein clashes
T17
T17
33 3
Front 3
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_Leishmania_404
57% of hydrophobic surface appears solvent-exposed (17/30 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
Details
Why selected: Some docking support and good contact coverage.
Main concern: geometry warning; 10 clashes; 3 protein clashes; moderate strain Δ 26.8 and strain ΔE = 26.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 466.7 · logP 6.30 · TPSA 63.6
31.0 0.27 4.0586 -0.7779 17 26.84 466.7 6.30 63.6 5.379 0.40 0.39 0 0 0.50
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
geometry warning; 10 clashes; 3 protein clashes; moderate strain Δ 26.8
T17
T17
34 3
Front 3
Binding Weak
Geometry Bad
Data Complete
Action Reject
OHD_Leishmania_403
90% of hydrophobic surface is solvent-exposed (27/30 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
Details
Why selected: good contact coverage.
Main concern: geometry warning; 8 clashes; 3 protein clashes; moderate strain Δ 23.8 and strain ΔE = 23.8 kcal/mol.
Action: Reject this pose unless there is a compelling external reason to rescue the chemotype.
MW 468.7 · logP 6.09 · TPSA 66.8
21.0 0.20 4.1301 -0.6612 27 23.76 468.7 6.09 66.8 5.436 0.40 0.28 0 0 0.49
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
geometry warning; 8 clashes; 3 protein clashes; moderate strain Δ 23.8
T17
T17
35 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z18586609
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 5 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 404.5 · logP 4.67 · TPSA 75.3
48.0 0.45 1.1577 -0.8065 2 11.47 404.5 4.67 75.3 2.095 0.48 0.75 0 0 0.27
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 10 clashes; 5 protein contact clashes
T17
T17
36 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_ACDS_25
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 344.2 · logP 5.05 · TPSA 57.6
46.9 0.43 2.0659 -1.0494 2 10.13 344.2 5.05 57.6 2.481 0.50 0.68 0 0 0.48
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 7 clashes; 1 protein clash
T17
T17
37 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
TC271
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 297.3 · logP 2.30 · TPSA 91.4
48.4 0.44 1.5182 -1.0890 3 12.43 297.3 2.30 91.4 2.229 0.70 0.64 0 0 0.64
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 7 clashes; 1 protein clash
T17
T17
38 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
NMT-TY0541
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 7 protein contact clashes; high strain Δ 37.7, geometry warning, and strain ΔE = 37.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 338.3 · logP -0.31 · TPSA 173.1
47.4 0.48 1.1131 -0.9954 1 37.74 338.3 -0.31 173.1 2.400 0.60 0.66 0 0 0.51
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 7 clashes; 7 protein contact clashes; high strain Δ 37.7
T17
T17
39 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
CKP-35
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 241.3 · logP 1.91 · TPSA 59.5
46.2 0.44 2.1514 -1.2928 1 9.07 241.3 1.91 59.5 3.216 0.73 0.27 0 0 0.67
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 7 clashes; 1 protein clash
T17
T17
40 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z56896726
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 5 protein contact clashes; moderate strain Δ 22.6, geometry warning, and strain ΔE = 22.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 443.6 · logP 2.99 · TPSA 88.6
45.1 0.46 1.3858 -0.7641 2 22.63 443.6 2.99 88.6 2.176 0.55 0.41 0 0 0.59
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 5 protein contact clashes; moderate strain Δ 22.6
T17
T17
41 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
ulfkktlib_445
well-buried hydrophobics, native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 4 protein contact clashes; high strain Δ 38.2, geometry warning, and strain ΔE = 38.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 428.3 · logP 3.20 · TPSA 69.7
44.7 0.46 1.1930 -0.8097 4 38.17 428.3 3.20 69.7 3.282 0.62 0.70 0 0 0.53
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 4 protein contact clashes; high strain Δ 38.2
T17
T17
42 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_285
well-buried hydrophobics, native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 2 protein contact clashes; moderate strain Δ 25.2, geometry warning, and strain ΔE = 25.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 418.6 · logP 3.31 · TPSA 19.7
44.9 0.46 1.1117 -0.7193 3 25.24 418.6 3.31 19.7 5.487 0.62 0.72 0 0 0.75
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 13 clashes; 2 protein contact clashes; moderate strain Δ 25.2
T17
T17
43 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
NMT-TY0875
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 2 protein clashes; moderate strain Δ 20.9, geometry warning, and strain ΔE = 20.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 366.4 · logP 3.10 · TPSA 89.3
44.4 0.31 3.5900 -0.8765 2 20.92 366.4 3.10 89.3 1.898 0.58 0.59 0 0 0.73
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 14 clashes; 2 protein clashes; moderate strain Δ 20.9
T17
T17
44 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
NMT-TY0576
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash; high strain Δ 32.8, geometry warning, and strain ΔE = 32.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 355.4 · logP 1.24 · TPSA 144.0
45.2 0.47 1.5324 -0.9654 1 32.76 355.4 1.24 144.0 2.575 0.50 0.70 0 0 0.35
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Alerts x1, Geometry warning, geometry warning; 6 clashes; 1 protein clash; high strain Δ 32.8
T17
T17
45 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
ulfkktlib_1637
native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 22 clashes; 3 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 428.5 · logP 3.14 · TPSA 75.6
42.2 0.37 2.2043 -0.7018 8 13.30 428.5 3.14 75.6 2.828 0.55 0.70 0 0 0.64
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 22 clashes; 3 protein contact clashes
T17
T17
46 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z44848695
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 6 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 437.5 · logP 4.18 · TPSA 102.2
42.2 0.42 1.6376 -0.7190 4 10.34 437.5 4.18 102.2 2.378 0.36 0.62 0 0 0.32
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 6 protein contact clashes
T17
T17
47 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z56793767
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 19 clashes; 2 protein clashes, geometry warning, and strain ΔE = 18.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 378.4 · logP 4.55 · TPSA 66.9
41.0 0.26 4.1417 -0.8685 0 18.65 378.4 4.55 66.9 2.846 0.43 0.64 0 0 0.55
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 19 clashes; 2 protein clashes
T17
T17
48 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
KB_chagas_64
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 418.5 · logP 3.13 · TPSA 77.3
42.2 0.36 2.6128 -0.8183 6 11.15 418.5 3.13 77.3 2.114 0.55 0.56 0 0 0.64
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 1 protein clash
T17
T17
49 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z1521553711
well-buried hydrophobics
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes, geometry warning, and strain ΔE = 19.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 306.8 · logP 1.71 · TPSA 77.3
39.9 0.33 3.2127 -1.1889 0 19.35 306.8 1.71 77.3 3.937 0.70 0.21 0 0 0.61
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 10 clashes; 2 protein clashes
T17
T17
50 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
TC458
well-buried hydrophobics
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 3 protein clashes; moderate strain Δ 25.1 and strain ΔE = 25.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 453.6 · logP 4.18 · TPSA 80.4
39.3 0.20 4.7040 -0.7913 5 25.10 453.6 4.18 80.4 5.318 0.51 0.43 0 0 0.67
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
geometry warning; 11 clashes; 3 protein clashes; moderate strain Δ 25.1
T17
T17
51 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z92021212
native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 3 protein contact clashes, geometry warning, and strain ΔE = 18.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 474.6 · logP 4.89 · TPSA 98.8
38.9 0.47 1.3092 -0.7490 8 18.24 474.6 4.89 98.8 2.520 0.25 0.68 0 0 0.29
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 13 clashes; 3 protein contact clashes
T17
T17
52 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
NMT-TY0626
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 25.6, geometry warning, and strain ΔE = 25.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 369.5 · logP 1.63 · TPSA 144.0
43.2 0.48 1.2853 -0.9579 3 25.62 369.5 1.63 144.0 3.134 0.50 0.62 0 0 0.34
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Alerts x1, Geometry warning, geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 25.6
T17
T17
53 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z44305068
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 400.8 · logP 3.74 · TPSA 102.4
37.8 0.29 3.8312 -0.9148 6 14.03 400.8 3.74 102.4 2.336 0.58 0.34 0 0 0.65
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 7 clashes; 3 protein clashes
T17
T17
54 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_253
well-buried hydrophobics
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein contact clashes; moderate strain Δ 20.8, geometry warning, and strain ΔE = 20.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 473.7 · logP 2.94 · TPSA 14.2
39.3 0.45 0.9278 -0.6512 6 20.84 473.7 2.94 14.2 4.896 0.58 0.42 0 0 0.69
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 2 protein contact clashes; moderate strain Δ 20.8
T17
T17
55 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z123660746
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 3 protein clashes; high strain Δ 32.1, geometry warning, and strain ΔE = 32.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 360.4 · logP 1.69 · TPSA 95.7
40.0 0.22 4.0822 -0.9196 0 32.10 360.4 1.69 95.7 1.798 0.73 0.29 0 0 0.87
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 3 protein clashes; high strain Δ 32.1
T17
T17
56 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z108847942
reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 389.5 · logP 2.80 · TPSA 90.3
39.0 0.39 2.7361 -0.9286 7 16.04 389.5 2.80 90.3 2.100 0.62 0.18 0 0 0.80
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
T17
T17
57 4
Front 4
Binding Weak
Geometry Bad
Data Complete
Action Reject
Z57676781
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 3 protein clashes; 3 cofactor-context clashes and geometry warning.
Action: Reject this pose unless there is a compelling external reason to rescue the chemotype.
MW 379.3 · logP 4.77 · TPSA 56.2
35.6 0.20 4.5140 -0.9601 0 7.69 379.3 4.77 56.2 2.850 0.43 0.32 0 0 0.66
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 5 clashes; 3 protein clashes; 3 cofactor-context clashes
T17
T17
58 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_ACDS_26
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 433.1 · logP 5.26 · TPSA 57.6
41.3 0.35 2.8964 -1.0033 2 10.23 433.1 5.26 57.6 2.594 0.32 0.68 0 0 0.41
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
T17
T17
59 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z16547003
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 15 clashes; 4 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 450.6 · logP 6.28 · TPSA 71.5
38.6 0.46 1.6444 -0.7816 6 16.94 450.6 6.28 71.5 2.321 0.11 0.73 0 0 0.24
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 15 clashes; 4 protein contact clashes
T17
T17
60 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
NMT-TY0527
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes, geometry warning, and tox alerts x2.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 276.3 · logP 2.33 · TPSA 110.9
36.2 0.38 2.7248 -1.2313 0 16.54 276.3 2.33 110.9 2.222 0.39 0.37 0 0 0.66
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Alerts x2, Geometry warning, geometry warning; 7 clashes; 2 protein clashes
T17
T17
61 4
Front 4
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
NMT-TY0368
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 4 protein clashes; moderate strain Δ 24.1, geometry warning, and strain ΔE = 24.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 282.3 · logP -0.14 · TPSA 138.2
37.5 0.29 4.2834 -1.2485 0 24.14 282.3 -0.14 138.2 2.663 0.60 0.22 0 0 0.58
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Alerts x1, Geometry warning, geometry warning; 6 clashes; 4 protein clashes; moderate strain Δ 24.1
T17
T17
62 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z594284196
well-buried hydrophobics
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 2 clashes; 2 protein clashes; moderate strain Δ 22.4 and strain ΔE = 22.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 244.2 · logP -3.01 · TPSA 143.7
47.7 0.40 2.4231 -1.3377 2 22.36 244.2 -3.01 143.7 3.869 0.60 0.30 0 0 0.44
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
geometry warning; 2 clashes; 2 protein clashes; moderate strain Δ 22.4
T17
T17
63 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z57783660
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 16 clashes; 2 protein contact clashes; high strain Δ 31.0, geometry warning, and strain ΔE = 31.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 447.5 · logP 1.09 · TPSA 112.2
47.8 0.44 1.4231 -0.7043 1 31.02 447.5 1.09 112.2 2.942 0.66 0.61 0 0 0.41
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 16 clashes; 2 protein contact clashes; high strain Δ 31.0
T17
T17
64 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z57281539
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 300.7 · logP 4.12 · TPSA 69.1
48.4 0.40 2.2720 -1.0782 1 11.42 300.7 4.12 69.1 2.330 0.62 0.64 0 0 0.67
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
T17
T17
65 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z57009636
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 315.3 · logP 1.60 · TPSA 88.0
46.2 0.40 1.9065 -0.9905 3 10.90 315.3 1.60 88.0 2.587 0.73 0.51 0 0 0.75
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 9 clashes; 1 protein clash
T17
T17
66 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z56763036
well-buried hydrophobics
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 2 protein clashes, geometry warning, and strain ΔE = 18.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 322.4 · logP 3.29 · TPSA 87.0
45.4 0.37 2.7169 -1.0315 1 18.67 322.4 3.29 87.0 3.616 0.73 0.48 0 0 0.64
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 4 clashes; 2 protein clashes
T17
T17
67 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z1269163651
well-buried hydrophobics
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 2 clashes; 3 protein clashes; high strain Δ 40.0 and strain ΔE = 40.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 208.2 · logP -4.68 · TPSA 105.6
43.6 0.44 2.9633 -1.6394 6 40.04 208.2 -4.68 105.6 5.778 0.70 0.17 0 0 0.28
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
geometry warning; 2 clashes; 3 protein clashes; high strain Δ 40.0
T17
T17
68 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z2940609369
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 271.3 · logP 2.23 · TPSA 72.7
45.4 0.40 2.3795 -1.2099 4 10.03 271.3 2.23 72.7 2.818 0.73 0.51 0 0 0.63
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 10 clashes; 1 protein clash
T17
T17
69 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z31233831
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 362.5 · logP 2.61 · TPSA 98.0
44.0 0.25 3.9906 -0.9273 2 16.22 362.5 2.61 98.0 2.249 0.58 0.71 0 0 0.73
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 7 clashes; 3 protein clashes
T17
T17
70 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
MK188
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 459.5 · logP 4.65 · TPSA 64.8
44.0 0.41 1.9880 -0.7691 2 17.00 459.5 4.65 64.8 2.820 0.36 0.73 0 0 0.40
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 8 clashes; 1 protein clash
T17
T17
71 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z56896655
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 20.4, geometry warning, and strain ΔE = 20.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 432.0 · logP 5.94 · TPSA 72.5
43.3 0.42 1.9526 -0.7665 2 20.36 432.0 5.94 72.5 2.353 0.28 0.76 0 0 0.34
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 20.4
T17
T17
72 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_26
well-buried hydrophobics
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 3 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 474.5 · logP 2.21 · TPSA 52.0
43.8 0.42 1.3300 -0.6952 1 17.55 474.5 2.21 52.0 5.794 0.62 0.59 0 0 0.61
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 13 clashes; 3 protein contact clashes
T17
T17
73 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z56919893
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 3 protein clashes, geometry warning, and strain ΔE = 19.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 369.5 · logP 0.38 · TPSA 106.5
42.0 0.34 3.4586 -1.0308 4 19.28 369.5 0.38 106.5 2.672 0.70 0.36 0 0 0.48
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 5 clashes; 3 protein clashes
T17
T17
74 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_TC1_150
well-buried hydrophobics
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 23.8, geometry warning, and strain ΔE = 23.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 375.8 · logP 1.67 · TPSA 100.6
43.9 0.42 2.1934 -0.8675 5 23.83 375.8 1.67 100.6 3.534 0.70 0.43 0 0 0.64
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 23.8
T17
T17
75 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z57233591
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 318.3 · logP 3.56 · TPSA 66.8
42.1 0.42 2.0032 -1.0027 6 9.45 318.3 3.56 66.8 2.297 0.73 0.17 0 0 0.71
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 13 clashes; 1 protein clash
T17
T17
76 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
KB_HAT_38
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 17 clashes; 5 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 412.5 · logP 3.02 · TPSA 77.6
43.3 0.42 1.8153 -0.7945 1 15.64 412.5 3.02 77.6 3.038 0.58 0.32 0 0 0.60
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 17 clashes; 5 protein contact clashes
T17
T17
77 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_302
well-buried hydrophobics, native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 15 clashes; 4 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 398.6 · logP 3.81 · TPSA 32.7
45.6 0.43 1.5685 -0.7842 2 17.45 398.6 3.81 32.7 4.942 0.62 0.70 0 0 0.71
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 15 clashes; 4 protein contact clashes
T17
T17
78 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z56775819
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 28.9, geometry warning, and strain ΔE = 28.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 364.4 · logP 1.67 · TPSA 140.7
42.2 0.29 3.4815 -0.9251 0 28.88 364.4 1.67 140.7 2.474 0.60 0.52 0 0 0.55
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 28.9
T17
T17
79 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z45537946
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash; high strain Δ 31.1, geometry warning, and strain ΔE = 31.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 344.4 · logP 0.95 · TPSA 106.3
43.7 0.42 2.5391 -1.1217 1 31.13 344.4 0.95 106.3 1.784 0.73 0.12 0 0 0.84
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 9 clashes; 1 protein clash; high strain Δ 31.1
T17
T17
80 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
KB_HAT_192
well-buried hydrophobics
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein contact clash; high strain Δ 47.0, geometry warning, and strain ΔE = 47.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 466.6 · logP 2.20 · TPSA 96.1
41.3 0.45 0.8707 -0.6899 3 47.01 466.6 2.20 96.1 4.184 0.55 0.64 0 0 0.47
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 1 protein contact clash; high strain Δ 47.0
T17
T17
81 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z1508915075
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 211.2 · logP 0.44 · TPSA 103.8
41.6 0.39 3.1812 -1.4899 2 17.43 211.2 0.44 103.8 2.749 0.70 0.13 0 0 0.54
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 5 clashes; 3 protein clashes
T17
T17
82 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z27077125
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 3 protein contact clashes; moderate strain Δ 25.7, geometry warning, and strain ΔE = 25.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 416.5 · logP 3.83 · TPSA 75.7
41.1 0.44 1.1540 -0.7866 3 25.67 416.5 3.83 75.7 2.771 0.58 0.30 0 0 0.78
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 13 clashes; 3 protein contact clashes; moderate strain Δ 25.7
T17
T17
83 5
Front 5
Binding Weak
Geometry Bad
Data Complete
Action Reject
OHD_TbNat_18
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 3 protein clashes and geometry warning.
Action: Reject this pose unless there is a compelling external reason to rescue the chemotype.
MW 270.2 · logP 2.58 · TPSA 90.9
38.5 0.25 4.1093 -1.1335 3 9.30 270.2 2.58 90.9 2.297 0.70 0.17 0 0 0.63
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 3 protein clashes
T17
T17
84 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_43
well-buried hydrophobics
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 17 clashes; 2 protein contact clashes; moderate strain Δ 23.8, geometry warning, and strain ΔE = 23.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 489.7 · logP 3.15 · TPSA 54.2
39.4 0.44 1.5658 -0.7135 2 23.83 489.7 3.15 54.2 5.100 0.47 0.42 0 0 0.61
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 17 clashes; 2 protein contact clashes; moderate strain Δ 23.8
T17
T17
85 5
Front 5
Binding Weak
Geometry Bad
Data Complete
Action Reject
Z68196981
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 3 protein clashes; high strain Δ 33.8, geometry warning, and strain ΔE = 33.8 kcal/mol.
Action: Reject this pose unless there is a compelling external reason to rescue the chemotype.
MW 408.9 · logP 3.86 · TPSA 86.7
36.8 0.17 4.7557 -0.8900 0 33.79 408.9 3.86 86.7 1.967 0.62 0.37 0 0 0.75
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 8 clashes; 3 protein clashes; high strain Δ 33.8
T17
T17
86 5
Front 5
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
ulfkktlib_3002
38% of hydrophobic surface appears solvent-exposed (8/21 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 4 protein contact clashes, geometry warning, and strain ΔE = 19.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 385.5 · logP 1.52 · TPSA 93.8
33.8 0.44 1.2100 -0.7713 8 19.57 385.5 1.52 93.8 4.245 0.42 0.43 0 0 0.53
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Alerts x1, Geometry warning, geometry warning; 11 clashes; 4 protein contact clashes
T17
T17
87 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z56935963
well-buried hydrophobics, native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 2 protein clashes; moderate strain Δ 29.4, geometry warning, and strain ΔE = 29.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 392.5 · logP 0.90 · TPSA 101.2
45.9 0.37 2.8402 -0.8993 2 29.42 392.5 0.90 101.2 3.694 0.66 0.69 0 0 0.28
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 5 clashes; 2 protein clashes; moderate strain Δ 29.4
T17
T17
88 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z226217786
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 20.3, geometry warning, and strain ΔE = 20.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 380.4 · logP 0.43 · TPSA 101.5
46.2 0.34 2.8498 -0.8219 2 20.33 380.4 0.43 101.5 3.146 0.70 0.67 0 0 0.67
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 20.3
T17
T17
89 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
KB_HAT_83
well-buried hydrophobics, native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 1 protein clash; high strain Δ 33.2, geometry warning, and strain ΔE = 33.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 325.4 · logP 0.72 · TPSA 103.1
45.2 0.42 1.3747 -0.9367 2 33.22 325.4 0.72 103.1 3.918 0.66 0.73 0 0 0.57
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 4 clashes; 1 protein clash; high strain Δ 33.2
T17
T17
90 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z56833776
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash, geometry warning, and strain ΔE = 19.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 346.4 · logP 4.59 · TPSA 72.2
44.9 0.39 1.9955 -0.8838 1 18.95 346.4 4.59 72.2 2.032 0.62 0.42 0 0 0.53
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 10 clashes; 1 protein clash
T17
T17
91 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
KB_Leish_182
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 381.4 · logP 3.68 · TPSA 94.5
44.4 0.34 2.6593 -0.7770 2 15.19 381.4 3.68 94.5 2.488 0.58 0.59 0 0 0.70
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 14 clashes; 1 protein clash
T17
T17
92 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z1546616194
well-buried hydrophobics
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 2 protein clashes; high strain Δ 35.9, geometry warning, and strain ΔE = 35.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 287.2 · logP -0.05 · TPSA 136.4
40.9 0.41 2.6118 -1.1881 3 35.94 287.2 -0.05 136.4 3.382 0.70 0.23 0 0 0.65
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 4 clashes; 2 protein clashes; high strain Δ 35.9
T17
T17
93 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
TC249
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 29.4, geometry warning, and strain ΔE = 29.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 297.3 · logP 1.72 · TPSA 83.0
41.2 0.34 2.5617 -1.0233 1 29.41 297.3 1.72 83.0 2.860 0.73 0.31 0 0 0.59
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 29.4
T17
T17
94 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
KB_chagas_182
well-buried hydrophobics
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash; high strain Δ 39.0, geometry warning, and strain ΔE = 39.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 431.6 · logP 1.00 · TPSA 76.0
39.7 0.38 1.8858 -0.7683 2 38.96 431.6 1.00 76.0 3.574 0.66 0.34 0 0 0.68
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 9 clashes; 1 protein clash; high strain Δ 39.0
T17
T17
95 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
TC230
well-buried hydrophobics
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes; high strain Δ 42.3, geometry warning, and strain ΔE = 42.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 387.5 · logP -0.32 · TPSA 88.2
39.2 0.25 3.8693 -0.8293 1 42.35 387.5 -0.32 88.2 4.278 0.70 0.52 0 0 0.56
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 2 protein clashes; high strain Δ 42.3
T17
T17
96 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
ulfkktlib_1043
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 24.7, geometry warning, and strain ΔE = 24.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 284.3 · logP 0.03 · TPSA 108.0
39.5 0.34 3.1042 -1.1039 3 24.73 284.3 0.03 108.0 3.249 0.70 0.25 0 0 0.70
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 24.7
T17
T17
97 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z44591568
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash; high strain Δ 37.8, geometry warning, and strain ΔE = 37.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 431.9 · logP 4.79 · TPSA 96.5
39.7 0.27 2.7015 -0.7706 0 37.79 431.9 4.79 96.5 1.835 0.40 0.79 0 0 0.52
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 1 protein clash; high strain Δ 37.8
T17
T17
98 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z26394837
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes, geometry warning, and strain ΔE = 19.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 368.4 · logP 2.08 · TPSA 94.3
40.5 0.34 2.9586 -0.8829 3 19.51 368.4 2.08 94.3 2.736 0.62 0.30 0 0 0.71
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
T17
T17
99 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_303
well-buried hydrophobics, native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 6 protein contact clashes, geometry warning, and strain ΔE = 18.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 398.6 · logP 3.81 · TPSA 32.7
45.9 0.42 1.6947 -0.8060 2 18.43 398.6 3.81 32.7 4.932 0.62 0.75 0 0 0.71
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 14 clashes; 6 protein contact clashes
T17
T17
100 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
ulfkktlib_1053
well-buried hydrophobics
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 2 protein clashes; high strain Δ 33.0, geometry warning, and strain ΔE = 33.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 286.7 · logP -1.07 · TPSA 113.0
39.3 0.39 2.7229 -1.1931 4 33.05 286.7 -1.07 113.0 3.901 0.73 0.22 0 0 0.64
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 4 clashes; 2 protein clashes; high strain Δ 33.0
T17
T17
101 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_304
well-buried hydrophobics, native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 15 clashes; 1 protein clash; moderate strain Δ 23.4, geometry warning, and strain ΔE = 23.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 398.6 · logP 3.81 · TPSA 32.7
44.6 0.35 2.4813 -0.7521 1 23.37 398.6 3.81 32.7 4.936 0.62 0.76 0 0 0.71
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 15 clashes; 1 protein clash; moderate strain Δ 23.4
T17
T17
102 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
KB_HAT_17
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 1 protein clash; moderate strain Δ 22.4, geometry warning, and strain ΔE = 22.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 400.5 · logP 1.13 · TPSA 123.8
38.8 0.34 2.9294 -0.8433 5 22.36 400.5 1.13 123.8 3.166 0.63 0.34 0 0 0.59
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 13 clashes; 1 protein clash; moderate strain Δ 22.4
T17
T17
103 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z31238000
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 3 protein clashes; moderate strain Δ 22.0, geometry warning, and strain ΔE = 22.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 442.6 · logP 2.43 · TPSA 96.6
38.5 0.22 4.2373 -0.7758 1 21.95 442.6 2.43 96.6 2.263 0.55 0.39 0 0 0.74
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 3 protein clashes; moderate strain Δ 22.0
T17
T17
104 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
KB_HAT_86
reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 420.5 · logP 3.12 · TPSA 126.1
37.2 0.36 2.4644 -0.7938 7 15.42 420.5 3.12 126.1 3.140 0.52 0.39 0 0 0.52
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 1 protein clash
T17
T17
105 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_89
native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 14 clashes; 1 protein clash; high strain Δ 38.0, geometry warning, and strain ΔE = 38.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 462.7 · logP 0.57 · TPSA 41.2
37.6 0.37 2.7518 -0.6975 13 38.01 462.7 0.57 41.2 5.719 0.70 0.79 0 0 0.59
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 14 clashes; 1 protein clash; high strain Δ 38.0
T17
T17
106 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
NMT-TY0617
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 1 protein clash; high strain Δ 32.0, geometry warning, and strain ΔE = 32.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 383.5 · logP 1.87 · TPSA 144.0
42.4 0.43 1.7249 -0.9016 3 31.98 383.5 1.87 144.0 2.633 0.50 0.70 0 0 0.32
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Alerts x1, Geometry warning, geometry warning; 7 clashes; 1 protein clash; high strain Δ 32.0
T17
T17
107 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_197
well-buried hydrophobics
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 15 clashes; 1 protein clash; moderate strain Δ 25.3, geometry warning, and strain ΔE = 25.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 434.6 · logP 1.84 · TPSA 35.2
37.7 0.31 2.6810 -0.6965 3 25.29 434.6 1.84 35.2 5.904 0.73 0.34 0 0 0.68
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 15 clashes; 1 protein clash; moderate strain Δ 25.3
T17
T17
108 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z45901653
reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 488.9 · logP 3.48 · TPSA 52.6
34.7 0.39 2.2511 -0.8654 7 13.99 488.9 3.48 52.6 2.143 0.44 0.29 0 0 0.67
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Alerts x1, Geometry warning, geometry warning; 11 clashes; 1 protein clash
T17
T17
109 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
ulfkktlib_1639
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 16 clashes; 4 protein contact clashes, geometry warning, and strain ΔE = 19.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 448.5 · logP 4.59 · TPSA 75.2
38.8 0.39 1.8087 -0.6573 6 19.49 448.5 4.59 75.2 2.683 0.40 0.57 0 0 0.47
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 16 clashes; 4 protein contact clashes
T17
T17
110 6
Front 6
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_277
43% of hydrophobic surface appears solvent-exposed (13/30 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
Details
Why selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 14 clashes; 2 protein contact clashes; high strain Δ 32.4, geometry warning, and strain ΔE = 32.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 462.7 · logP 1.43 · TPSA 24.2
35.7 0.44 1.3403 -0.6694 13 32.42 462.7 1.43 24.2 5.688 0.70 0.51 0 0 0.52
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 14 clashes; 2 protein contact clashes; high strain Δ 32.4
T17
T17
111 6
Front 6
Binding Weak
Geometry Bad
Data Complete
Action Reject
NMT-TY0819
reasonable synthesis profile
Details
Why selected: well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 3 protein clashes, geometry warning, and strain ΔE = 18.1 kcal/mol.
Action: Reject this pose unless there is a compelling external reason to rescue the chemotype.
MW 352.4 · logP -0.16 · TPSA 119.3
36.4 0.22 4.4370 -0.9482 7 18.07 352.4 -0.16 119.3 2.218 0.73 0.25 0 0 0.79
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 3 protein clashes
T17
T17
112 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z89541367
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 1 protein clash; moderate strain Δ 27.6, geometry warning, and strain ΔE = 27.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 361.4 · logP 3.22 · TPSA 74.8
48.7 0.36 2.4363 -0.8494 1 27.60 361.4 3.22 74.8 2.697 0.62 0.94 0 0 0.75
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 13 clashes; 1 protein clash; moderate strain Δ 27.6
T17
T17
113 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
ulfkktlib_1155
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 16 clashes; 2 protein clashes; high strain Δ 30.9, geometry warning, and strain ΔE = 30.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 355.4 · logP 2.15 · TPSA 106.9
43.5 0.32 3.6245 -0.8587 2 30.95 355.4 2.15 106.9 2.856 0.58 0.61 0 0 0.33
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 16 clashes; 2 protein clashes; high strain Δ 30.9
T17
T17
114 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_TB2022_22
well-buried hydrophobics, native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash; moderate strain Δ 24.3, geometry warning, and strain ΔE = 24.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 418.5 · logP 1.60 · TPSA 126.5
43.2 0.34 2.6761 -0.7819 3 24.28 418.5 1.60 126.5 3.557 0.63 0.69 0 0 0.41
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 1 protein clash; moderate strain Δ 24.3
T17
T17
115 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_TB2022_41
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 2 protein clashes; moderate strain Δ 27.3, geometry warning, and strain ΔE = 27.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 326.4 · logP 1.84 · TPSA 109.6
43.5 0.23 4.1877 -0.9274 3 27.33 326.4 1.84 109.6 2.866 0.70 0.79 0 0 0.66
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 14 clashes; 2 protein clashes; moderate strain Δ 27.3
T17
T17
116 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z49620451
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 15 clashes; 2 protein clashes; moderate strain Δ 27.0, geometry warning, and strain ΔE = 27.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 360.4 · logP 3.51 · TPSA 102.5
45.0 0.28 3.8795 -0.8357 2 27.05 360.4 3.51 102.5 2.496 0.58 0.79 0 0 0.28
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 15 clashes; 2 protein clashes; moderate strain Δ 27.0
T17
T17
117 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_Babesia_56
well-buried hydrophobics
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 15 clashes; 1 protein clash; moderate strain Δ 24.5, geometry warning, and strain ΔE = 24.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 461.6 · logP 1.28 · TPSA 92.4
41.0 0.32 2.7455 -0.6701 3 24.54 461.6 1.28 92.4 3.938 0.66 0.47 0 0 0.54
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 15 clashes; 1 protein clash; moderate strain Δ 24.5
T17
T17
118 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
KB_HAT_128
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes; 1 cofactor-context clash, geometry warning, and strain ΔE = 19.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 300.4 · logP 2.21 · TPSA 87.6
40.8 0.33 3.0290 -1.0632 1 19.93 300.4 2.21 87.6 2.809 0.58 0.34 0 0 0.75
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 8 clashes; 2 protein clashes; 1 cofactor-context clash
T17
T17
119 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z1157834224
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 22.6, geometry warning, and strain ΔE = 22.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 384.5 · logP 4.16 · TPSA 82.7
41.0 0.37 1.8863 -0.8437 2 22.65 384.5 4.16 82.7 2.584 0.40 0.71 0 0 0.36
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 22.6
T17
T17
120 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
KB_Leish_55
well-buried hydrophobics
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 340.8 · logP 3.44 · TPSA 56.9
39.0 0.23 4.0847 -0.9745 2 14.67 340.8 3.44 56.9 3.344 0.62 0.46 0 0 0.77
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 7 clashes; 3 protein clashes
T17
T17
121 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_MAC_38
native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 6 protein contact clashes; moderate strain Δ 29.9, geometry warning, and strain ΔE = 29.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 393.8 · logP 4.40 · TPSA 88.0
38.4 0.39 1.6054 -0.8304 7 29.88 393.8 4.40 88.0 2.507 0.40 0.77 0 0 0.39
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 6 protein contact clashes; moderate strain Δ 29.9
T17
T17
122 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_TB2021_39
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 3 protein clashes; moderate strain Δ 20.8, geometry warning, and strain ΔE = 20.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 332.4 · logP 3.04 · TPSA 46.1
37.5 0.21 4.8114 -1.0190 1 20.83 332.4 3.04 46.1 3.155 0.62 0.33 0 0 0.77
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 3 protein clashes; moderate strain Δ 20.8
T17
T17
123 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
ulfkktlib_1615
native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash; high strain Δ 40.1, geometry warning, and strain ΔE = 40.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 438.5 · logP 3.14 · TPSA 81.4
39.9 0.36 2.3690 -0.6854 7 40.09 438.5 3.14 81.4 3.497 0.58 0.70 0 0 0.50
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 1 protein clash; high strain Δ 40.1
T17
T17
124 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_TbNat_71
Hydrophobic burial looks adequate: 33% exposed (10/30 atoms). No penalty flagged.
Details
Why selected: Some docking support and good contact coverage.
Main concern: geometry warning; 6 clashes; 2 protein clashes; high strain Δ 37.4 and strain ΔE = 37.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 504.7 · logP 4.00 · TPSA 118.2
36.2 0.29 3.1616 -0.6427 10 37.41 504.7 4.00 118.2 5.238 0.51 0.32 0 0 0.36
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
geometry warning; 6 clashes; 2 protein clashes; high strain Δ 37.4
T17
T17
125 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z56920485
41% of hydrophobic surface appears solvent-exposed (7/17 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes; high strain Δ 37.0, geometry warning, and strain ΔE = 37.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 348.4 · logP 1.17 · TPSA 92.0
38.8 0.33 3.1832 -0.9647 7 36.97 348.4 1.17 92.0 3.762 0.70 0.56 0 0 0.50
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 7 clashes; 2 protein clashes; high strain Δ 37.0
T17
T17
126 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
TC392
well-buried hydrophobics
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 428.5 · logP 4.30 · TPSA 108.8
36.0 0.34 2.6315 -0.8373 4 17.86 428.5 4.30 108.8 3.823 0.48 0.37 0 0 0.53
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 1 protein clash
T17
T17
127 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z56853873
reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes, geometry warning, and strain ΔE = 19.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 416.5 · logP 2.68 · TPSA 80.2
37.0 0.34 2.6135 -0.8089 7 19.38 416.5 2.68 80.2 2.238 0.55 0.31 0 0 0.65
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 8 clashes; 2 protein clashes
T17
T17
128 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z30857952
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 27.6, geometry warning, and strain ΔE = 27.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 348.4 · logP 1.24 · TPSA 98.5
36.8 0.24 3.4320 -0.9620 3 27.60 348.4 1.24 98.5 1.743 0.70 0.30 0 0 0.79
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 27.6
T17
T17
129 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z199054106
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 6 protein contact clashes; high strain Δ 40.1, geometry warning, and strain ΔE = 40.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 392.5 · logP 6.58 · TPSA 57.4
36.4 0.39 1.5343 -0.7766 4 40.11 392.5 6.58 57.4 2.359 0.28 0.64 0 0 0.36
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 6 protein contact clashes; high strain Δ 40.1
T17
T17
130 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_TB2021_35
well-buried hydrophobics
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 4 protein clashes; moderate strain Δ 26.6, geometry warning, and strain ΔE = 26.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 301.2 · logP 0.51 · TPSA 136.4
38.5 0.26 3.9347 -1.1809 2 26.62 301.2 0.51 136.4 3.504 0.66 0.47 0 0 0.66
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 5 clashes; 4 protein clashes; moderate strain Δ 26.6
T17
T17
131 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
KB_chagas_170
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 383.4 · logP 4.21 · TPSA 67.0
34.0 0.21 4.2253 -0.8306 2 14.29 383.4 4.21 67.0 3.106 0.43 0.34 0 0 0.71
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 9 clashes; 3 protein clashes
T17
T17
132 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z19222909
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 17 clashes; 6 protein contact clashes, geometry warning, and strain ΔE = 19.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 450.6 · logP 6.36 · TPSA 71.5
36.8 0.37 2.1524 -0.7425 4 19.22 450.6 6.36 71.5 2.777 0.11 0.79 0 0 0.24
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 17 clashes; 6 protein contact clashes
T17
T17
133 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
TC92
well-buried hydrophobics
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 406.6 · logP 6.13 · TPSA 37.3
35.5 0.33 2.5556 -0.7415 4 15.14 406.6 6.13 37.3 3.997 0.43 0.35 0 0 0.61
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 1 protein clash
T17
T17
134 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_137
43% of hydrophobic surface appears solvent-exposed (13/30 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
Details
Why selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 15 clashes; 4 protein contact clashes; moderate strain Δ 30.0, geometry warning, and strain ΔE = 30.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 476.7 · logP 0.91 · TPSA 32.4
34.9 0.41 1.6684 -0.6966 13 29.97 476.7 0.91 32.4 5.379 0.70 0.50 0 0 0.65
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 15 clashes; 4 protein contact clashes; moderate strain Δ 30.0
T17
T17
135 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_133
native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 15 clashes; 1 protein clash; high strain Δ 36.8, geometry warning, and strain ΔE = 36.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 447.7 · logP 1.80 · TPSA 38.0
36.2 0.33 2.8556 -0.7108 13 36.78 447.7 1.80 38.0 5.848 0.73 0.80 0 0 0.62
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 15 clashes; 1 protein clash; high strain Δ 36.8
T17
T17
136 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_219
well-buried hydrophobics
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 1 protein clash; high strain Δ 33.1, geometry warning, and strain ΔE = 33.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 491.7 · logP 1.77 · TPSA 38.4
36.1 0.32 2.5583 -0.6243 6 33.08 491.7 1.77 38.4 5.862 0.70 0.44 0 0 0.55
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 13 clashes; 1 protein clash; high strain Δ 33.1
T17
T17
137 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_301
native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 14 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 412.6 · logP 3.99 · TPSA 45.9
36.2 0.37 2.6656 -0.8609 9 18.56 412.6 3.99 45.9 4.900 0.55 0.71 0 0 0.62
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Alerts x1, Geometry warning, geometry warning; 14 clashes; 1 protein clash
T17
T17
138 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_85
Hydrophobic burial looks adequate: 34% exposed (11/32 atoms). No penalty flagged.
Details
Why selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 13 clashes; 1 protein clash; high strain Δ 33.8, geometry warning, and strain ΔE = 33.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 502.7 · logP 1.59 · TPSA 32.4
33.0 0.34 2.1713 -0.6040 11 33.84 502.7 1.59 32.4 5.589 0.70 0.42 0 0 0.63
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 13 clashes; 1 protein clash; high strain Δ 33.8
T17
T17
139 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_21
38% of hydrophobic surface appears solvent-exposed (12/32 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
Details
Why selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 15 clashes; 1 protein clash; moderate strain Δ 25.8, geometry warning, and strain ΔE = 25.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 502.7 · logP 1.49 · TPSA 41.2
32.7 0.33 2.6138 -0.7113 12 25.84 502.7 1.49 41.2 5.702 0.70 0.45 0 0 0.54
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 15 clashes; 1 protein clash; moderate strain Δ 25.8
T17
T17
140 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_78
44% of hydrophobic surface appears solvent-exposed (14/32 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
Details
Why selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 16 clashes; 4 protein contact clashes; moderate strain Δ 26.2, geometry warning, and strain ΔE = 26.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 504.7 · logP 2.13 · TPSA 55.4
32.4 0.39 1.9072 -0.6288 14 26.24 504.7 2.13 55.4 6.089 0.58 0.53 0 0 0.53
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 16 clashes; 4 protein contact clashes; moderate strain Δ 26.2
T17
T17
141 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_20
47% of hydrophobic surface appears solvent-exposed (14/30 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
Details
Why selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 16 clashes; 1 protein clash; moderate strain Δ 26.4, geometry warning, and strain ΔE = 26.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 476.7 · logP 0.96 · TPSA 41.2
31.5 0.30 3.0347 -0.6585 14 26.39 476.7 0.96 41.2 5.478 0.70 0.45 0 0 0.56
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 16 clashes; 1 protein clash; moderate strain Δ 26.4
T17
T17
142 7
Front 7
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z45901563
reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 523.3 · logP 4.14 · TPSA 52.6
28.8 0.38 2.3413 -0.8482 7 18.00 523.3 4.14 52.6 2.302 0.14 0.30 0 0 0.61
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Alerts x1, Geometry warning, geometry warning; 12 clashes; 1 protein clash
T17
T17
143 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z27619347
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 25.2, geometry warning, and strain ΔE = 25.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 527.7 · logP 2.37 · TPSA 113.1
43.5 0.33 2.5850 -0.6611 1 25.16 527.7 2.37 113.1 2.875 0.55 0.62 0 0 0.59
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 25.2
T17
T17
144 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z49628846
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 22.7, geometry warning, and strain ΔE = 22.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 344.4 · logP 4.45 · TPSA 74.8
40.4 0.25 3.0354 -0.8551 2 22.72 344.4 4.45 74.8 2.226 0.62 0.61 0 0 0.43
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 22.7
T17
T17
145 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z1546624232
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 16 clashes; 2 protein clashes, geometry warning, and strain ΔE = 19.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 494.6 · logP 3.17 · TPSA 87.5
39.8 0.30 3.4018 -0.7055 3 19.21 494.6 3.17 87.5 3.024 0.44 0.65 0 0 0.37
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 16 clashes; 2 protein clashes
T17
T17
146 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z16383985
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 3 protein clashes, geometry warning, and strain ΔE = 19.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 397.4 · logP 3.04 · TPSA 105.8
39.7 0.18 4.4515 -0.8259 3 19.63 397.4 3.04 105.8 2.973 0.58 0.75 0 0 0.51
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 3 protein clashes
T17
T17
147 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
MK214
Hydrophobic burial looks adequate: 30% exposed (7/23 atoms). No penalty flagged.
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 20.2, geometry warning, and strain ΔE = 20.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 409.5 · logP 3.80 · TPSA 100.6
38.6 0.27 3.4096 -0.7676 7 20.22 409.5 3.80 100.6 3.606 0.66 0.60 0 0 0.61
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 20.2
T17
T17
148 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_Babesia_59
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 23.4, geometry warning, and strain ΔE = 23.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 371.4 · logP 2.53 · TPSA 103.8
36.9 0.26 3.4883 -0.8754 1 23.41 371.4 2.53 103.8 2.915 0.58 0.28 0 0 0.73
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 23.4
T17
T17
149 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z49620424
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash; high strain Δ 31.9, geometry warning, and strain ΔE = 31.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 344.4 · logP 3.80 · TPSA 82.2
41.0 0.35 2.6163 -0.9844 3 31.95 344.4 3.80 82.2 2.292 0.58 0.57 0 0 0.32
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 1 protein clash; high strain Δ 31.9
T17
T17
150 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
MK190
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 26.2, geometry warning, and strain ΔE = 26.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 520.1 · logP 7.11 · TPSA 58.6
33.5 0.37 2.4484 -0.7405 6 26.20 520.1 7.11 58.6 2.932 0.04 0.78 0 0 0.25
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 26.2
T17
T17
151 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
ulfkktlib_1343
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 3 protein clashes; moderate strain Δ 24.9, geometry warning, and strain ΔE = 24.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 295.3 · logP 1.71 · TPSA 89.9
35.9 0.23 3.9567 -1.0930 3 24.92 295.3 1.71 89.9 3.193 0.70 0.36 0 0 0.76
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 9 clashes; 3 protein clashes; moderate strain Δ 24.9
T17
T17
152 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
TC490
well-buried hydrophobics
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 20.3, geometry warning, and strain ΔE = 20.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 394.5 · logP 3.58 · TPSA 92.4
38.3 0.32 3.2743 -0.9363 4 20.26 394.5 3.58 92.4 3.774 0.58 0.46 0 0 0.63
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 20.3
T17
T17
153 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z55466823
well-buried hydrophobics
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 3 protein clashes; high strain Δ 31.7, geometry warning, and strain ΔE = 31.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 414.5 · logP 1.19 · TPSA 123.4
34.2 0.23 3.9525 -0.8343 4 31.66 414.5 1.19 123.4 4.019 0.63 0.34 0 0 0.69
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 9 clashes; 3 protein clashes; high strain Δ 31.7
T17
T17
154 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z19316109
reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 3 protein clashes; moderate strain Δ 21.1, geometry warning, and strain ΔE = 21.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 444.5 · logP 2.38 · TPSA 101.5
36.2 0.19 4.4021 -0.7478 8 21.07 444.5 2.38 101.5 2.200 0.55 0.64 0 0 0.46
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 3 protein clashes; moderate strain Δ 21.1
T17
T17
155 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
MK172
well-buried hydrophobics
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 20 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 438.6 · logP 5.92 · TPSA 63.7
33.1 0.27 3.3214 -0.7315 5 14.20 438.6 5.92 63.7 3.831 0.28 0.56 0 0 0.48
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 20 clashes; 1 protein clash
T17
T17
156 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_MAC_39
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 2 protein clashes; moderate strain Δ 23.7, geometry warning, and strain ΔE = 23.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 376.8 · logP 3.66 · TPSA 100.9
39.6 0.25 3.7541 -0.8237 6 23.74 376.8 3.66 100.9 2.634 0.58 0.73 0 0 0.40
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 14 clashes; 2 protein clashes; moderate strain Δ 23.7
T17
T17
157 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_TB2022_36
well-buried hydrophobics, native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 25 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 540.6 · logP 5.65 · TPSA 89.0
32.6 0.22 4.0361 -0.6004 2 18.15 540.6 5.65 89.0 3.323 0.11 0.70 0 0 0.27
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 25 clashes; 1 protein clash
T17
T17
158 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
MK61
Hydrophobic burial looks adequate: 34% exposed (10/29 atoms). No penalty flagged.
Details
Why selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 15 clashes; 1 protein clash; high strain Δ 64.2, geometry warning, and strain ΔE = 64.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 495.6 · logP 2.52 · TPSA 91.5
31.1 0.35 2.3713 -0.7087 10 64.23 495.6 2.52 91.5 4.303 0.58 0.51 0 0 0.61
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 15 clashes; 1 protein clash; high strain Δ 64.2
T17
T17
159 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_395
38% of hydrophobic surface appears solvent-exposed (9/24 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
Details
Why selected: Some docking support and good contact coverage.
Main concern: geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 27.7, geometry warning, and strain ΔE = 27.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 366.5 · logP 2.36 · TPSA 44.9
31.8 0.31 3.0341 -0.8296 9 27.70 366.5 2.36 44.9 5.001 0.65 0.25 0 0 0.76
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 27.7
T17
T17
160 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
MK216
well-buried hydrophobics
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 22.0, geometry warning, and strain ΔE = 22.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 409.5 · logP 3.80 · TPSA 100.6
36.9 0.29 3.2694 -0.8099 6 21.97 409.5 3.80 100.6 3.511 0.66 0.36 0 0 0.57
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 22.0
T17
T17
161 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_316
Hydrophobic burial looks adequate: 31% exposed (9/29 atoms). No penalty flagged.
Details
Why selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 16 clashes; 1 protein clash; moderate strain Δ 21.5, geometry warning, and strain ΔE = 21.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 426.6 · logP 4.18 · TPSA 42.9
33.7 0.37 2.6160 -0.8151 9 21.52 426.6 4.18 42.9 4.546 0.43 0.51 0 0 0.62
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 16 clashes; 1 protein clash; moderate strain Δ 21.5
T17
T17
162 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
NMT-TY0624
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 26.3, geometry warning, and strain ΔE = 26.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 395.5 · logP 2.16 · TPSA 144.0
34.2 0.31 3.8084 -0.9927 4 26.30 395.5 2.16 144.0 2.694 0.42 0.41 0 0 0.45
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Alerts x1, Geometry warning, geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 26.3
T17
T17
163 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_82
well-buried hydrophobics
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 16 clashes; 1 protein clash; high strain Δ 32.3, geometry warning, and strain ΔE = 32.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 504.7 · logP 2.13 · TPSA 55.4
36.6 0.31 2.8481 -0.6140 3 32.28 504.7 2.13 55.4 5.872 0.58 0.52 0 0 0.51
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 16 clashes; 1 protein clash; high strain Δ 32.3
T17
T17
164 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_186
native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 16 clashes; 2 protein clashes; high strain Δ 46.8, geometry warning, and strain ΔE = 46.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 502.7 · logP 1.49 · TPSA 41.2
35.0 0.23 3.9608 -0.6092 8 46.84 502.7 1.49 41.2 5.824 0.70 0.78 0 0 0.54
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 16 clashes; 2 protein clashes; high strain Δ 46.8
T17
T17
165 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_84
well-buried hydrophobics
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 15 clashes; 1 protein clash; high strain Δ 40.5, geometry warning, and strain ΔE = 40.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 477.7 · logP 3.01 · TPSA 54.2
34.2 0.34 2.6422 -0.7119 4 40.52 477.7 3.01 54.2 4.820 0.47 0.46 0 0 0.60
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 15 clashes; 1 protein clash; high strain Δ 40.5
T17
T17
166 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
MK28
reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 11 clashes; 4 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 356.5 · logP 4.61 · TPSA 58.9
30.7 0.16 4.7488 -0.9044 11 13.71 356.5 4.61 58.9 2.688 0.58 0.46 0 0 0.79
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 4 protein clashes
T17
T17
167 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
MK153
Hydrophobic burial looks adequate: 29% exposed (7/24 atoms). No penalty flagged.
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 409.5 · logP 4.74 · TPSA 96.0
32.9 0.27 3.5125 -0.7957 7 17.10 409.5 4.74 96.0 3.552 0.48 0.38 0 0 0.54
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 13 clashes; 2 protein clashes
T17
T17
168 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
MK160
Hydrophobic burial looks adequate: 35% exposed (8/23 atoms). No penalty flagged.
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 410.5 · logP 4.14 · TPSA 108.8
33.8 0.32 2.7219 -0.7747 8 17.07 410.5 4.14 108.8 3.520 0.48 0.40 0 0 0.55
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 1 protein clash
T17
T17
169 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_229
Hydrophobic burial looks adequate: 28% exposed (9/32 atoms). No penalty flagged.
Details
Why selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 16 clashes; 2 protein clashes; high strain Δ 38.8, geometry warning, and strain ΔE = 38.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 489.8 · logP 0.64 · TPSA 16.6
31.0 0.25 3.6152 -0.6690 9 38.76 489.8 0.64 16.6 6.534 0.70 0.49 0 0 0.54
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 16 clashes; 2 protein clashes; high strain Δ 38.8
T17
T17
170 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_188
native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 18 clashes; 1 protein clash; moderate strain Δ 28.9, geometry warning, and strain ΔE = 28.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 501.7 · logP 2.91 · TPSA 40.0
32.2 0.32 2.5177 -0.6114 15 28.90 501.7 2.91 40.0 4.976 0.58 0.69 0 0 0.64
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 18 clashes; 1 protein clash; moderate strain Δ 28.9
T17
T17
171 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_222
43% of hydrophobic surface appears solvent-exposed (13/30 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
Details
Why selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 17 clashes; 5 protein contact clashes; moderate strain Δ 26.1, geometry warning, and strain ΔE = 26.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 477.7 · logP 1.38 · TPSA 38.4
32.4 0.32 2.1620 -0.6354 13 26.09 477.7 1.38 38.4 5.510 0.70 0.51 0 0 0.59
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 17 clashes; 5 protein contact clashes; moderate strain Δ 26.1
T17
T17
172 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_57
Hydrophobic burial looks adequate: 33% exposed (11/33 atoms). No penalty flagged.
Details
Why selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 17 clashes; 1 protein clash; high strain Δ 34.7, geometry warning, and strain ΔE = 34.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 516.8 · logP 1.98 · TPSA 32.4
32.7 0.34 2.3845 -0.6218 11 34.70 516.8 1.98 32.4 5.564 0.70 0.42 0 0 0.62
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 17 clashes; 1 protein clash; high strain Δ 34.7
T17
T17
173 8
Front 8
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OSA_Lib_313
native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 17 clashes; 2 protein contact clashes; high strain Δ 34.3, geometry warning, and strain ΔE = 34.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 579.9 · logP 5.20 · TPSA 31.2
23.9 0.39 1.6863 -0.5315 16 34.29 579.9 5.20 31.2 5.779 0.11 0.71 0 0 0.51
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 17 clashes; 2 protein contact clashes; high strain Δ 34.3
T17
T17
174 9
Front 9
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z18509545
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 23.1, geometry warning, and strain ΔE = 23.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 410.5 · logP 2.78 · TPSA 84.9
41.9 0.31 2.9076 -0.7654 2 23.10 410.5 2.78 84.9 2.948 0.55 0.61 0 0 0.72
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 23.1
T17
T17
175 9
Front 9
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z295463994
reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 333.3 · logP 3.37 · TPSA 78.9
37.3 0.29 2.8955 -0.9007 7 16.33 333.3 3.37 78.9 2.828 0.58 0.52 0 0 0.80
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 2 protein clashes
T17
T17
176 9
Front 9
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
KB_HAT_92
well-buried hydrophobics, native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 15 clashes; 1 protein clash; high strain Δ 32.1, geometry warning, and strain ΔE = 32.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 467.6 · logP 4.19 · TPSA 108.1
37.2 0.32 2.7493 -0.7219 2 32.14 467.6 4.19 108.1 3.276 0.28 0.72 0 0 0.52
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 15 clashes; 1 protein clash; high strain Δ 32.1
T17
T17
177 9
Front 9
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_Leishmania_257
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes; high strain Δ 44.3, geometry warning, and strain ΔE = 44.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 432.3 · logP 2.34 · TPSA 81.8
36.8 0.31 2.9017 -0.7762 4 44.33 432.3 2.34 81.8 3.131 0.58 0.43 0 0 0.54
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 9 clashes; 2 protein clashes; high strain Δ 44.3
T17
T17
178 9
Front 9
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
KB_chagas_127
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 2 protein clashes; high strain Δ 36.8, geometry warning, and strain ΔE = 36.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 427.5 · logP 3.09 · TPSA 87.3
36.3 0.32 2.8538 -0.7104 6 36.81 427.5 3.09 87.3 3.193 0.55 0.45 0 0 0.62
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 2 protein clashes; high strain Δ 36.8
T17
T17
179 9
Front 9
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z56821783
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 21.3, geometry warning, and strain ΔE = 21.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 331.4 · logP 2.06 · TPSA 75.8
37.2 0.29 3.3784 -1.0087 5 21.26 331.4 2.06 75.8 2.217 0.58 0.36 0 0 0.82
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 21.3
T17
T17
180 9
Front 9
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z56890899
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 17 clashes; 1 protein clash; high strain Δ 39.4, geometry warning, and strain ΔE = 39.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 418.5 · logP 4.07 · TPSA 84.8
35.9 0.24 3.3132 -0.7686 1 39.39 418.5 4.07 84.8 2.288 0.36 0.66 0 0 0.68
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 17 clashes; 1 protein clash; high strain Δ 39.4
T17
T17
181 9
Front 9
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z57907181
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash; moderate strain Δ 29.9, geometry warning, and strain ΔE = 29.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 471.5 · logP 4.29 · TPSA 107.9
35.9 0.32 2.7416 -0.6624 3 29.87 471.5 4.29 107.9 2.979 0.25 0.66 0 0 0.37
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 1 protein clash; moderate strain Δ 29.9
T17
T17
182 9
Front 9
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
MK136
native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 11 clashes; 2 protein clashes, geometry warning, and strain ΔE = 18.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 409.5 · logP 4.98 · TPSA 85.0
36.9 0.33 3.0256 -0.8674 10 18.60 409.5 4.98 85.0 3.291 0.48 0.73 0 0 0.62
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 2 protein clashes
T17
T17
183 9
Front 9
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z56833421
reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 3 protein clashes; high strain Δ 54.9, geometry warning, and strain ΔE = 54.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 378.4 · logP 0.79 · TPSA 127.5
35.1 0.24 3.8477 -0.8699 8 54.86 378.4 0.79 127.5 2.691 0.66 0.64 0 0 0.34
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 5 clashes; 3 protein clashes; high strain Δ 54.9
T17
T17
184 9
Front 9
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z68348244
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 3 protein clashes; high strain Δ 52.9, geometry warning, and strain ΔE = 52.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 432.3 · logP 1.83 · TPSA 124.6
34.5 0.20 4.0297 -0.8222 2 52.93 432.3 1.83 124.6 2.581 0.60 0.63 0 0 0.54
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Alerts x1, Geometry warning, geometry warning; 9 clashes; 3 protein clashes; high strain Δ 52.9
T17
T17
185 9
Front 9
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z18551701
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 26.8, geometry warning, and strain ΔE = 26.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 498.1 · logP 4.09 · TPSA 88.6
36.5 0.32 2.3456 -0.7442 2 26.85 498.1 4.09 88.6 2.776 0.25 0.68 0 0 0.52
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 26.8
T17
T17
186 9
Front 9
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
MK194
native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 17 clashes; 2 protein clashes; moderate strain Δ 22.2, geometry warning, and strain ΔE = 22.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 428.0 · logP 4.48 · TPSA 63.2
34.6 0.25 3.8514 -0.8468 8 22.23 428.0 4.48 63.2 3.846 0.43 0.71 0 0 0.68
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 17 clashes; 2 protein clashes; moderate strain Δ 22.2
T17
T17
187 9
Front 9
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z32448862
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 2 protein clashes; 2 cofactor-context clashes; high strain Δ 35.5, geometry warning, and strain ΔE = 35.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 462.3 · logP 3.91 · TPSA 97.4
34.7 0.13 4.8894 -0.8363 1 35.52 462.3 3.91 97.4 1.990 0.44 0.65 0 0 0.58
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 2 protein clashes; 2 cofactor-context clashes; high strain Δ 35.5
T17
T17
188 9
Front 9
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z56983508
reasonable synthesis profile
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash; high strain Δ 35.5, geometry warning, and strain ΔE = 35.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 466.0 · logP 3.06 · TPSA 78.9
32.6 0.33 2.6037 -0.7306 8 35.51 466.0 3.06 78.9 2.137 0.44 0.33 0 0 0.68
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 1 protein clash; high strain Δ 35.5
T17
T17
189 9
Front 9
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z1501485351
reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 3 protein clashes; high strain Δ 33.7, geometry warning, and strain ΔE = 33.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 365.8 · logP 2.66 · TPSA 96.0
33.2 0.24 4.2384 -0.9684 8 33.66 365.8 2.66 96.0 3.153 0.62 0.40 0 0 0.65
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 7 clashes; 3 protein clashes; high strain Δ 33.7
T17
T17
190 9
Front 9
Binding Weak
Geometry Bad
Data Complete
Action Reject
Z32421752
reasonable synthesis profile
Details
Why selected: well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 3 protein clashes; 2 cofactor-context clashes; moderate strain Δ 23.6, geometry warning, and strain ΔE = 23.6 kcal/mol.
Action: Reject this pose unless there is a compelling external reason to rescue the chemotype.
MW 403.9 · logP 0.56 · TPSA 149.4
33.8 0.19 4.7803 -0.9548 7 23.61 403.9 0.56 149.4 1.963 0.60 0.37 0 0 0.67
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 8 clashes; 3 protein clashes; 2 cofactor-context clashes; moderate strain Δ 23.6
T17
T17
191 9
Front 9
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_TC1_87
well-buried hydrophobics
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash; high strain Δ 39.2, geometry warning, and strain ΔE = 39.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 448.6 · logP 3.83 · TPSA 47.7
31.8 0.35 2.1251 -0.7156 6 39.17 448.6 3.83 47.7 3.792 0.52 0.37 0 0 0.63
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Alerts x1, Geometry warning, geometry warning; 9 clashes; 1 protein clash; high strain Δ 39.2
T17
T17
192 9
Front 9
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z44856621
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes; 4 cofactor-context clashes; high strain Δ 37.8, geometry warning, and strain ΔE = 37.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 534.5 · logP 5.11 · TPSA 105.4
30.8 0.32 3.2078 -0.8283 5 37.84 534.5 5.11 105.4 2.452 0.07 0.66 0 0 0.25
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 2 protein clashes; 4 cofactor-context clashes; high strain Δ 37.8
T17
T17
193 9
Front 9
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_Schistosoma_116
Hydrophobic burial looks adequate: 32% exposed (8/25 atoms). No penalty flagged.
Details
Why selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 20 clashes; 1 protein clash; moderate strain Δ 21.6, geometry warning, and strain ΔE = 21.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 428.5 · logP 3.32 · TPSA 81.6
27.6 0.27 3.3713 -0.7786 8 21.57 428.5 3.32 81.6 5.443 0.55 0.28 0 0 0.70
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Alerts x1, Geometry warning, geometry warning; 20 clashes; 1 protein clash; moderate strain Δ 21.6
T17
T17
194 10
Front 10
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z19160931
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 27.4, geometry warning, and strain ΔE = 27.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 407.5 · logP 2.60 · TPSA 124.5
42.7 0.30 3.2167 -0.9047 2 27.39 407.5 2.60 124.5 2.697 0.52 0.80 0 0 0.58
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 27.4
T17
T17
195 10
Front 10
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z49547615
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 16 clashes; 1 protein clash; moderate strain Δ 25.3, geometry warning, and strain ΔE = 25.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 425.4 · logP 3.47 · TPSA 90.6
40.2 0.28 2.8848 -0.7008 5 25.25 425.4 3.47 90.6 2.397 0.55 0.70 0 0 0.39
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 16 clashes; 1 protein clash; moderate strain Δ 25.3
T17
T17
196 10
Front 10
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_TbNat_74
native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; high strain Δ 43.2 and strain ΔE = 43.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 460.7 · logP 4.40 · TPSA 98.0
40.3 0.24 3.7280 -0.7415 7 43.16 460.7 4.40 98.0 4.975 0.51 0.68 0 0 0.46
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
geometry warning; 10 clashes; 2 protein clashes; high strain Δ 43.2
T17
T17
197 10
Front 10
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
Z17189141
native-like contacts, reasonable synthesis profile
Details
Why selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 29.7, geometry warning, and strain ΔE = 29.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 452.5 · logP 3.18 · TPSA 114.9
37.5 0.30 3.3265 -0.7314 7 29.70 452.5 3.18 114.9 2.375 0.44 0.70 0 0 0.41
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 29.7
T17
T17
198 10
Front 10
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
OHD_Schistosoma_101
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash, geometry warning, and strain ΔE = 19.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 435.3 · logP 4.72 · TPSA 120.6
36.6 0.28 2.9006 -0.8142 3 19.08 435.3 4.72 120.6 2.702 0.33 0.65 0 0 0.61
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 11 clashes; 1 protein clash
T17
T17
199 10
Front 10
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
KB_Leish_41
well-buried hydrophobics, reasonable synthesis profile
Details
Why selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 2 protein clashes; high strain Δ 42.0, geometry warning, and strain ΔE = 42.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 430.5 · logP 2.24 · TPSA 113.7
37.8 0.29 3.4111 -0.7675 3 42.00 430.5 2.24 113.7 2.836 0.55 0.54 0 0 0.50
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 12 clashes; 2 protein clashes; high strain Δ 42.0
T17
T17
200 10
Front 10
Binding Medium
Geometry Bad
Data Complete
Action Redock or minimize
KB_chagas_60
native-like contacts
Details
Why selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 14 clashes; 3 protein clashes; high strain Δ 33.2, geometry warning, and strain ΔE = 33.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 344.4 · logP 3.08 · TPSA 73.4
34.0 0.22 4.1541 -0.8585 10 33.18 344.4 3.08 73.4 4.515 0.62 0.76 0 0 0.60
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
Geometry warning, geometry warning; 14 clashes; 3 protein clashes; high strain Δ 33.2
Score composition ▼ show
Docking 28% · final rank, interaction-normalized score, raw docking score
Burial 18% · absolute exposed hydrophobic atom count (lower is better)
Strain 14% · strain delta, intra score, geometry sanity
Safety / ADMET 18% · ADMET score with hERG/AMES/DILI/bioaccumulation penalties — Pareto objective
Ecotoxicology 9% · fish/daphnia/algae LC50 classes + bioaccumulation + persistence — Pareto objective
Synthesis 10% · SA score when available, otherwise Fsp3 proxy
Native similarity 12% · contact and H-bond recall when a native reference exists
Diversity shortlist 0% · cached shortlist already includes the novelty-aware selection step

How ranking works: Pareto fronts are built from six default objectives — docking score, ligand efficiency, burial depth, strain energy, ADMET safety, and ecotoxicology (fish/daphnia/algae LC₅₀ + bioaccumulation + persistence). Front 1 contains non-dominated ligands: no other ligand beats them across all six objectives simultaneously. Inside each front, ligands are ordered by a compromise score with explicit penalties for PAINS, reactivity, toxicity alerts, geometry warnings, excluded poses, and artifact annotations. The top 200 are returned using a diversity-aware selection step.

Methodology ▼ show
1. Candidate definition. For each target we keep one best pose per ligand, so the shortlist is not inflated by many similar poses of the same compound.
2. Objective set. Each ligand is evaluated across docking quality, absolute nonpolar solvent exposure (`n_exposed`), conformational strain, native-like interaction similarity when a native reference exists, safety and ecotoxicology, synthesizability, and general developability indicators such as QED.
2a. SASA / burial source. `SASA: done` = cached FreeSASA metrics. `queued/running` = background worker scheduled. `failed` = worker failed. `missing` = no SASA cached yet.
3. Liability penalties. PAINS motifs, reactive groups, toxicity alerts, artifact annotations, geometry warnings, and excluded-pose flags reduce the compromise score and are shown explicitly.
4. Pareto ranking. Front 1 = non-dominated ligands (no other ligand is better in all objectives simultaneously). Lower front number = more balanced profile.
5. Missing SASA handling. Missing SASA lowers `Data completeness` to `Provisional` but does not automatically reject a ligand. Binding and geometry axes stay independent.
6. Compromise score. `100 × clamp(weighted positive − liability penalty − missing-data penalty)`. Weights: docking 28%, burial 18%, strain 14%, safety/ecotox 18%, synthesis 10%, native similarity 12% (when reference exists).
7. Component details. Docking = `final_rank_score` 55% + `score_inter_norm` 30% + raw `score` 15%. Strain = `strain_delta` 55% + `score_intra_norm` 30% + geometry sanity 15%.
8. Final shortlist. Top 50 per target taken front-by-front with diversity-aware selection — near-duplicate analogs do not dominate.
How to read the table. `Pareto` = non-dominated layer, `Compromise` = within-front ordering score, `n_exposed` = burial proxy (lower is better), `Strain dE` = conformational stress, colored dots = quick green/orange/red cue.
How to use selections. Mark compounds row-by-row, save to `Current`/`Temp`/`A/B/C` sets, export to SDF/XLSX/CSV, or send to downstream analysis pages.