T. brucei ODC · T14
T. brucei
PDB 1NJJ
Protein: Ornithine decarboxylase
Binding site: G418 binding site
Receptor context: 1 cofactors / ions kept for scoring, 0 ligand-like HETATM excluded.
Kept context: A:ORX602
Targets
1
each capped at 50 ligands
Best-pose candidates
615
one best pose per ligand per target
Synth metric
SA score
direct SA metric
Absolute burial proxy
n_exposed
absolute exposed hydrophobic atoms, not fraction
Pareto front 1
11
non-dominated ligands across all selected targets
Burial source
FreeSASA 200
Proxy 0 · Missing 0
Metrics coverage
Done 200
Pending 0 · Failed 0 · Missing 0
Diversity shortlist
Novelty 0.45
High novelty 200 · Close analogs 0
New vs legacy top 50
Added 2 · Dropped 2
Stayed 198 of 200 legacy picks
T14
Native
Front 1: 11
200 / 615 shortlisted
Best: Z1069312128 · score 55.0
Pareto layers observed: 11
Metrics: done 200 · pending 0 · failed 0 · missing 0
Diversity: novelty 0.45 · close analogs 0
New vs legacy: added 2 · dropped 2 · stayed 198/200
Added: KB_HAT_169, OHD_MV-22
·
Dropped: Z28139131, TC410
| Target | 2D | Rank | Pareto | Assessment | Ligand | Compromise | Docking | Final rank | Inter norm | n_exposed | Strain dE | MW | cLogP | TPSA | SA score | Safety | Native sim | PAINS | Reactive | QED | SASA | Flags | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| T14 T14 |
|
1 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1069312128
strong docking, well-buried hydrophobics, clean safety profile
DetailsWhy selected: Strong docking score and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 6 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 190.2 · logP 1.03 · TPSA 62.0
|
55.0 | 0.78 | -0.1038 | -1.6892 | 3 | 14.92 | 190.2 | 1.03 | 62.0 | 2.479 | 0.76 | 0.33 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 6 protein contact clashes
|
|
| T14 T14 |
|
2 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_3513
well-buried hydrophobics, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 191.3 · logP 1.55 · TPSA 43.8
|
53.2 | 0.68 | 1.4110 | -1.8399 | 4 | 4.07 | 191.3 | 1.55 | 43.8 | 2.969 | 0.76 | 0.25 | 0 | 0 | 0.53 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 2 protein clashes
|
|
| T14 T14 |
|
3 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z382721012
well-buried hydrophobics, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 169.2 · logP 0.08 · TPSA 73.6
|
52.0 | 0.74 | 0.7772 | -1.9582 | 6 | 17.64 | 169.2 | 0.08 | 73.6 | 2.549 | 0.76 | 0.32 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 1 protein clash
|
|
| T14 T14 |
|
4 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z44305861
well-buried hydrophobics, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 237.3 · logP 2.88 · TPSA 49.3
|
49.0 | 0.48 | 2.1442 | -1.2376 | 1 | 11.60 | 237.3 | 2.88 | 49.3 | 2.008 | 0.76 | 0.30 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes
|
|
| T14 T14 |
|
5 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2377
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 197.6 · logP 0.96 · TPSA 73.6
|
47.3 | 0.70 | 0.8090 | -1.6878 | 6 | 10.99 | 197.6 | 0.96 | 73.6 | 2.972 | 0.70 | 0.22 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 4 clashes; 1 protein clash
|
|
| T14 T14 |
|
6 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57108356
well-buried hydrophobics, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 218.2 · logP 1.69 · TPSA 70.7
|
47.6 | 0.48 | 2.5846 | -1.5145 | 0 | 17.98 | 218.2 | 1.69 | 70.7 | 2.438 | 0.76 | 0.29 | 0 | 0 | 0.52 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T14 T14 |
|
7 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TB2022_44
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 335.2 · logP 3.13 · TPSA 91.1
|
46.2 | 0.51 | 1.5541 | -1.0362 | 2 | 9.32 | 335.2 | 3.13 | 91.1 | 3.167 | 0.58 | 0.38 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T14 T14 |
|
8 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0142
well-buried hydrophobics
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 214.2 · logP -0.95 · TPSA 107.2
|
46.2 | 0.50 | 2.4482 | -1.5627 | 3 | 12.50 | 214.2 | -0.95 | 107.2 | 3.638 | 0.73 | 0.30 | 0 | 0 | 0.52 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 2 protein clashes
|
|
| T14 T14 |
|
9 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1255449978
well-buried hydrophobics
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 2 protein clashes; moderate strain Δ 23.8, geometry warning, and strain ΔE = 23.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 184.2 · logP -0.68 · TPSA 77.3
|
46.3 | 0.59 | 1.7514 | -1.7693 | 1 | 23.84 | 184.2 | -0.68 | 77.3 | 3.884 | 0.70 | 0.30 | 0 | 0 | 0.47 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 2 protein clashes; moderate strain Δ 23.8
|
|
| T14 T14 |
|
10 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57108748
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 254.2 · logP 2.87 · TPSA 70.7
|
46.8 | 0.42 | 2.8706 | -1.3315 | 0 | 16.54 | 254.2 | 2.87 | 70.7 | 2.062 | 0.73 | 0.33 | 0 | 0 | 0.52 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T14 T14 |
|
11 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Suspicious
Data
Complete
Action
Inspect
|
1NJJ
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: Native reference ligand.
Action: Inspect the pose manually, especially around clashes, hydrogen bonds, and pocket fit.
MW 500.6 · logP -8.79 · TPSA 257.8
|
38.7 | 0.00 | - | - | 13 | - | 500.6 | -8.79 | 257.8 | 6.824 | 0.50 | 1.00 | 0 | 0 | 0.16 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Native reference ligand
|
|
| T14 T14 |
|
12 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z871871932
well-buried hydrophobics
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 2 protein clashes.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 179.2 · logP -3.25 · TPSA 116.2
|
55.0 | 0.60 | 2.2105 | -1.9475 | 6 | 16.76 | 179.2 | -3.25 | 116.2 | 3.844 | 0.70 | 0.36 | 0 | 0 | 0.29 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 4 clashes; 2 protein clashes
|
|
| T14 T14 |
|
13 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z111781472
well-buried hydrophobics, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 5 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 266.3 · logP 2.72 · TPSA 52.9
|
50.3 | 0.66 | 0.4277 | -1.1491 | 7 | 15.92 | 266.3 | 2.72 | 52.9 | 2.008 | 0.76 | 0.30 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 5 protein contact clashes
|
|
| T14 T14 |
|
14 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z19652710
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 4 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 305.4 · logP 3.32 · TPSA 68.0
|
49.6 | 0.67 | 0.0775 | -1.0985 | 6 | 5.21 | 305.4 | 3.32 | 68.0 | 2.127 | 0.62 | 0.30 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 4 protein contact clashes
|
|
| T14 T14 |
|
15 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2370
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 205.0 · logP -0.18 · TPSA 83.8
|
47.2 | 0.63 | 2.2832 | -2.2101 | 4 | 15.82 | 205.0 | -0.18 | 83.8 | 2.975 | 0.67 | 0.38 | 0 | 0 | 0.44 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 4 clashes; 3 protein clashes
|
|
| T14 T14 |
|
16 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z234853480
clean safety profile, reasonable synthesis profile
DetailsWhy selected: Good docking score and good contact coverage.
Main concern: geometry warning; 3 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 234.3 · logP 2.07 · TPSA 58.3
|
47.3 | 0.62 | 1.1446 | -1.4181 | 11 | 10.58 | 234.3 | 2.07 | 58.3 | 2.679 | 0.76 | 0.38 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 1 protein clash
|
|
| T14 T14 |
|
17 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_373
clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 257.3 · logP 2.07 · TPSA 69.6
|
47.2 | 0.50 | 2.0518 | -1.2476 | 8 | 11.84 | 257.3 | 2.07 | 69.6 | 1.777 | 0.76 | 0.39 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash
|
|
| T14 T14 |
|
18 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_1468
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 158.6 · logP 0.72 · TPSA 63.8
|
46.8 | 0.64 | 2.2672 | -2.2431 | 5 | 10.87 | 158.6 | 0.72 | 63.8 | 2.760 | 0.70 | 0.22 | 0 | 0 | 0.47 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 3 clashes; 3 protein clashes
|
|
| T14 T14 |
|
19 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57281539
reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 5 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 300.7 · logP 4.12 · TPSA 69.1
|
46.2 | 0.60 | 0.7798 | -1.0386 | 9 | 7.85 | 300.7 | 4.12 | 69.1 | 2.330 | 0.62 | 0.33 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 5 protein contact clashes
|
|
| T14 T14 |
|
20 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45956756
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 263.3 · logP 3.82 · TPSA 53.4
|
47.4 | 0.48 | 1.8894 | -1.1029 | 2 | 10.39 | 263.3 | 3.82 | 53.4 | 2.238 | 0.73 | 0.30 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T14 T14 |
|
21 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC1_33
well-buried hydrophobics, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 246.3 · logP 2.71 · TPSA 70.7
|
46.4 | 0.50 | 2.1409 | -1.3966 | 3 | 17.18 | 246.3 | 2.71 | 70.7 | 2.884 | 0.76 | 0.33 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T14 T14 |
|
22 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_1731
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 186.2 · logP 1.43 · TPSA 63.8
|
46.2 | 0.56 | 2.2643 | -1.7404 | 4 | 12.51 | 186.2 | 1.43 | 63.8 | 1.866 | 0.70 | 0.26 | 0 | 0 | 0.55 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T14 T14 |
|
23 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z241957544
well-buried hydrophobics, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 282.1 · logP 3.95 · TPSA 49.3
|
46.4 | 0.38 | 3.0915 | -1.2181 | 1 | 13.57 | 282.1 | 3.95 | 49.3 | 1.585 | 0.76 | 0.30 | 0 | 0 | 0.88 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 3 protein clashes
|
|
| T14 T14 |
|
24 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_245
93% of hydrophobic surface is solvent-exposed (14/15 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 3 clashes; 2 protein clashes; moderate strain Δ 22.5 and strain ΔE = 22.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 300.4 · logP 0.04 · TPSA 96.2
|
44.3 | 0.49 | 1.7741 | -1.0416 | 14 | 22.51 | 300.4 | 0.04 | 96.2 | 5.018 | 0.73 | 0.28 | 0 | 0 | 0.55 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 3 clashes; 2 protein clashes; moderate strain Δ 22.5
|
|
| T14 T14 |
|
25 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC231
clean safety profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 263.3 · logP -0.55 · TPSA 51.4
|
44.3 | 0.59 | 1.5521 | -1.4066 | 9 | 13.23 | 263.3 | -0.55 | 51.4 | 4.750 | 0.76 | 0.29 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 1 protein clash
|
|
| T14 T14 |
|
26 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_757
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 205.2 · logP 0.02 · TPSA 75.4
|
45.2 | 0.40 | 3.2207 | -1.4588 | 1 | 15.62 | 205.2 | 0.02 | 75.4 | 2.785 | 0.73 | 0.29 | 0 | 0 | 0.41 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 3 protein clashes
|
|
| T14 T14 |
|
27 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z235344915
well-buried hydrophobics, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 179.2 · logP 1.30 · TPSA 52.5
|
44.2 | 0.45 | 2.9530 | -1.6778 | 4 | 15.33 | 179.2 | 1.30 | 52.5 | 3.075 | 0.76 | 0.30 | 0 | 0 | 0.53 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes
|
|
| T14 T14 |
|
28 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56763036
well-buried hydrophobics
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 27.5, geometry warning, and strain ΔE = 27.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 322.4 · logP 3.61 · TPSA 87.0
|
44.2 | 0.46 | 1.9878 | -0.9699 | 1 | 27.51 | 322.4 | 3.61 | 87.0 | 4.155 | 0.73 | 0.33 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 27.5
|
|
| T14 T14 |
|
29 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2989
reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 239.2 · logP 1.65 · TPSA 94.2
|
41.8 | 0.42 | 2.8029 | -1.2406 | 8 | 11.20 | 239.2 | 1.65 | 94.2 | 2.977 | 0.73 | 0.30 | 0 | 0 | 0.48 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes
|
|
| T14 T14 |
|
30 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57183373
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 3 protein clashes; moderate strain Δ 25.4, geometry warning, and strain ΔE = 25.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 286.2 · logP 2.23 · TPSA 111.1
|
41.0 | 0.29 | 3.9650 | -1.2053 | 0 | 25.35 | 286.2 | 2.23 | 111.1 | 2.753 | 0.70 | 0.33 | 0 | 0 | 0.55 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 3 protein clashes; moderate strain Δ 25.4
|
|
| T14 T14 |
|
31 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z19126905
reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 292.4 · logP 3.80 · TPSA 54.5
|
39.0 | 0.30 | 3.6416 | -1.0600 | 9 | 12.34 | 292.4 | 3.80 | 54.5 | 2.110 | 0.73 | 0.30 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 3 protein clashes
|
|
| T14 T14 |
|
32 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z275022726
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 1 clash; 2 protein clashes; moderate strain Δ 21.2 and strain ΔE = 21.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 333.4 · logP 2.74 · TPSA 94.5
|
49.5 | 0.46 | 2.0042 | -1.0763 | 7 | 21.24 | 333.4 | 2.74 | 94.5 | 2.955 | 0.62 | 0.42 | 0 | 0 | 0.66 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 1 clash; 2 protein clashes; moderate strain Δ 21.2
|
|
| T14 T14 |
|
33 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1269163651
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 3 protein clashes; high strain Δ 47.2 and strain ΔE = 47.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 208.2 · logP -4.68 · TPSA 105.6
|
46.9 | 0.51 | 2.7802 | -1.7340 | 7 | 47.23 | 208.2 | -4.68 | 105.6 | 5.778 | 0.70 | 0.45 | 0 | 0 | 0.28 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 3 clashes; 3 protein clashes; high strain Δ 47.2
|
|
| T14 T14 |
|
34 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_3043
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 2 protein clashes, geometry warning, and strain ΔE = 18.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 181.2 · logP 0.36 · TPSA 87.6
|
46.1 | 0.63 | 1.6940 | -1.8274 | 4 | 18.38 | 181.2 | 0.36 | 87.6 | 2.823 | 0.67 | 0.30 | 0 | 0 | 0.30 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 4 clashes; 2 protein clashes
|
|
| T14 T14 |
|
35 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z50086561
reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 8 clashes; 4 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 309.3 · logP -0.17 · TPSA 79.8
|
45.0 | 0.61 | 0.6152 | -0.9770 | 11 | 14.79 | 309.3 | -0.17 | 79.8 | 2.213 | 0.67 | 0.50 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 8 clashes; 4 protein contact clashes
|
|
| T14 T14 |
|
36 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z46032413
reasonable synthesis profile
DetailsWhy selected: Good docking score and good contact coverage.
Main concern: geometry warning; 9 clashes; 4 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 338.8 · logP 4.44 · TPSA 55.1
|
44.9 | 0.60 | 0.7539 | -1.0271 | 13 | 12.74 | 338.8 | 4.44 | 55.1 | 2.113 | 0.73 | 0.36 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 4 protein contact clashes
|
|
| T14 T14 |
|
37 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2655
well-buried hydrophobics
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 4 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 333.5 · logP 3.22 · TPSA 36.7
|
44.1 | 0.52 | 1.2341 | -0.8833 | 6 | 9.67 | 333.5 | 3.22 | 36.7 | 3.299 | 0.62 | 0.33 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 4 protein contact clashes
|
|
| T14 T14 |
|
38 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_983
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 7 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 296.3 · logP 5.03 · TPSA 49.8
|
44.5 | 0.51 | 1.4412 | -0.9479 | 7 | 4.61 | 296.3 | 5.03 | 49.8 | 2.346 | 0.62 | 0.29 | 0 | 0 | 0.52 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 7 protein contact clashes
|
|
| T14 T14 |
|
39 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1037335854
clean safety profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 7 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 281.1 · logP 2.43 · TPSA 59.3
|
43.5 | 0.54 | 2.2133 | -1.5850 | 11 | 13.93 | 281.1 | 2.43 | 59.3 | 3.685 | 0.76 | 0.38 | 0 | 0 | 0.83 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes
|
|
| T14 T14 |
|
40 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z30994396
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 22.5, geometry warning, and strain ΔE = 22.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 309.3 · logP 2.38 · TPSA 83.4
|
42.6 | 0.38 | 2.8000 | -1.0108 | 2 | 22.49 | 309.3 | 2.38 | 83.4 | 2.043 | 0.62 | 0.35 | 0 | 0 | 0.91 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 22.5
|
|
| T14 T14 |
|
41 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TB2022_42
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 295.3 · logP 2.41 · TPSA 99.1
|
44.1 | 0.36 | 3.0388 | -1.0417 | 4 | 15.10 | 295.3 | 2.41 | 99.1 | 2.022 | 0.70 | 0.41 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes
|
|
| T14 T14 |
|
42 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC2_35
well-buried hydrophobics
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash; high strain Δ 39.9, geometry warning, and strain ΔE = 39.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 452.0 · logP -0.00 · TPSA 62.4
|
40.9 | 0.38 | 2.3256 | -0.7484 | 2 | 39.94 | 452.0 | -0.00 | 62.4 | 3.797 | 0.73 | 0.38 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash; high strain Δ 39.9
|
|
| T14 T14 |
|
43 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z26348254
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash, geometry warning, and strain ΔE = 19.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 330.4 · logP 2.74 · TPSA 81.4
|
43.7 | 0.45 | 1.9093 | -0.9658 | 2 | 19.61 | 330.4 | 2.74 | 81.4 | 1.977 | 0.62 | 0.27 | 0 | 0 | 0.88 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash
|
|
| T14 T14 |
|
44 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2876
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 270.3 · logP 0.54 · TPSA 97.1
|
40.6 | 0.46 | 2.2190 | -1.1152 | 9 | 17.66 | 270.3 | 0.54 | 97.1 | 2.514 | 0.67 | 0.45 | 0 | 0 | 0.43 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 10 clashes; 1 protein clash
|
|
| T14 T14 |
|
45 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z2737721067
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 20.3, geometry warning, and strain ΔE = 20.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 282.3 · logP 3.59 · TPSA 78.4
|
42.5 | 0.43 | 2.7393 | -1.1933 | 6 | 20.35 | 282.3 | 3.59 | 78.4 | 2.360 | 0.70 | 0.33 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 20.3
|
|
| T14 T14 |
|
46 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TbNat_18
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 270.2 · logP 2.58 · TPSA 90.9
|
42.0 | 0.36 | 3.4062 | -1.2251 | 9 | 5.64 | 270.2 | 2.58 | 90.9 | 2.297 | 0.70 | 0.44 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 3 protein clashes
|
|
| T14 T14 |
|
47 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z44868759
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 3 protein clashes; moderate strain Δ 21.2, geometry warning, and strain ΔE = 21.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 331.2 · logP 2.90 · TPSA 76.5
|
40.4 | 0.32 | 3.4434 | -1.1030 | 1 | 21.21 | 331.2 | 2.90 | 76.5 | 2.857 | 0.58 | 0.36 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 3 protein clashes; moderate strain Δ 21.2
|
|
| T14 T14 |
|
48 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
CKP-29
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 274.3 · logP 3.24 · TPSA 45.1
|
39.9 | 0.50 | 1.7284 | -1.0711 | 11 | 14.20 | 274.3 | 3.24 | 45.1 | 2.936 | 0.67 | 0.38 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T14 T14 |
|
49 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2300
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes; high strain Δ 31.4, geometry warning, and strain ΔE = 31.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 268.3 · logP 1.39 · TPSA 67.9
|
42.3 | 0.39 | 2.7116 | -1.0990 | 4 | 31.41 | 268.3 | 1.39 | 67.9 | 3.120 | 0.73 | 0.46 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes; high strain Δ 31.4
|
|
| T14 T14 |
|
50 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56801866
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 10 clashes; 6 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 318.3 · logP 3.82 · TPSA 72.2
|
40.9 | 0.53 | 1.2521 | -0.9560 | 13 | 8.81 | 318.3 | 3.82 | 72.2 | 2.073 | 0.62 | 0.30 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 6 protein contact clashes
|
|
| T14 T14 |
|
51 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z26396151
clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 11 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 297.4 · logP 3.21 · TPSA 58.6
|
39.8 | 0.47 | 2.0666 | -1.0755 | 17 | 15.12 | 297.4 | 3.21 | 58.6 | 2.380 | 0.76 | 0.39 | 0 | 0 | 0.91 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash
|
|
| T14 T14 |
|
52 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TB2021_42
well-buried hydrophobics
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes; high strain Δ 32.0, geometry warning, and strain ΔE = 32.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 293.3 · logP -0.09 · TPSA 100.6
|
39.8 | 0.44 | 2.4058 | -1.1214 | 7 | 32.03 | 293.3 | -0.09 | 100.6 | 3.771 | 0.73 | 0.32 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes; high strain Δ 32.0
|
|
| T14 T14 |
|
53 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z46033738
clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 8 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 292.3 · logP 3.93 · TPSA 57.5
|
39.2 | 0.38 | 2.8430 | -1.0724 | 13 | 10.32 | 292.3 | 3.93 | 57.5 | 2.282 | 0.76 | 0.33 | 0 | 0 | 0.82 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes
|
|
| T14 T14 |
|
54 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56785135
clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 3 protein clashes; moderate strain Δ 25.9, geometry warning, and strain ΔE = 25.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 272.3 · logP 2.25 · TPSA 73.1
|
38.7 | 0.36 | 3.1940 | -1.1923 | 9 | 25.94 | 272.3 | 2.25 | 73.1 | 2.628 | 0.76 | 0.34 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 3 protein clashes; moderate strain Δ 25.9
|
|
| T14 T14 |
|
55 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z237100734
clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 3 protein clashes; moderate strain Δ 23.0, geometry warning, and strain ΔE = 23.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 318.8 · logP 1.80 · TPSA 69.6
|
37.6 | 0.25 | 4.1728 | -1.1137 | 9 | 22.98 | 318.8 | 1.80 | 69.6 | 2.099 | 0.76 | 0.42 | 0 | 0 | 0.91 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 3 protein clashes; moderate strain Δ 23.0
|
|
| T14 T14 |
|
56 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_1343
62% of hydrophobic surface is solvent-exposed (10/16 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 8 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 296.4 · logP 0.99 · TPSA 91.5
|
38.1 | 0.40 | 2.5064 | -1.0075 | 10 | 16.42 | 296.4 | 0.99 | 91.5 | 3.586 | 0.70 | 0.31 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash
|
|
| T14 T14 |
|
57 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56779217
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 297.7 · logP 4.45 · TPSA 49.3
|
43.1 | 0.29 | 3.6767 | -1.0840 | 1 | 14.66 | 297.7 | 4.45 | 49.3 | 1.678 | 0.73 | 0.29 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 3 protein clashes
|
|
| T14 T14 |
|
58 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z19656164
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 316.3 · logP 1.69 · TPSA 98.7
|
40.6 | 0.32 | 3.3748 | -1.0054 | 7 | 16.01 | 316.3 | 1.69 | 98.7 | 2.133 | 0.70 | 0.37 | 0 | 0 | 0.71 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes
|
|
| T14 T14 |
|
59 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_3273
well-buried hydrophobics
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes; high strain Δ 69.1, geometry warning, and strain ΔE = 69.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 265.3 · logP -0.81 · TPSA 91.2
|
35.5 | 0.36 | 3.4538 | -1.2330 | 1 | 69.06 | 265.3 | -0.81 | 91.2 | 5.236 | 0.70 | 0.38 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes; high strain Δ 69.1
|
|
| T14 T14 |
|
60 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57233591
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 12 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 318.3 · logP 3.56 · TPSA 66.8
|
37.0 | 0.28 | 3.5618 | -0.9140 | 14 | 5.77 | 318.3 | 3.56 | 66.8 | 2.297 | 0.73 | 0.42 | 0 | 0 | 0.71 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 3 protein clashes
|
|
| T14 T14 |
|
61 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TB2023_19
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 10 clashes; 5 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 363.4 · logP 4.16 · TPSA 65.5
|
36.1 | 0.54 | 1.1281 | -0.9053 | 19 | 12.11 | 363.4 | 4.16 | 65.5 | 2.402 | 0.54 | 0.33 | 0 | 0 | 0.70 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 5 protein contact clashes
|
|
| T14 T14 |
|
62 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TB2021_18
well-buried hydrophobics
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 26.2, geometry warning, and strain ΔE = 26.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 347.1 · logP 0.36 · TPSA 106.4
|
38.7 | 0.33 | 3.2579 | -1.1039 | 4 | 26.21 | 347.1 | 0.36 | 106.4 | 4.097 | 0.73 | 0.38 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 26.2
|
|
| T14 T14 |
|
63 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC69
59% of hydrophobic surface appears solvent-exposed (10/17 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 8 clashes; 3 protein clashes; moderate strain Δ 21.4, geometry warning, and strain ΔE = 21.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 274.4 · logP 3.34 · TPSA 60.7
|
35.0 | 0.31 | 3.4110 | -1.1103 | 10 | 21.41 | 274.4 | 3.34 | 60.7 | 3.910 | 0.73 | 0.33 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 3 protein clashes; moderate strain Δ 21.4
|
|
| T14 T14 |
|
64 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC89
96% of hydrophobic surface is solvent-exposed (24/25 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 8 clashes; 3 protein clashes; moderate strain Δ 24.6 and strain ΔE = 24.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 429.6 · logP 3.56 · TPSA 91.4
|
31.7 | 0.18 | 4.4710 | -0.7461 | 24 | 24.58 | 429.6 | 3.56 | 91.4 | 4.540 | 0.70 | 0.44 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 8 clashes; 3 protein clashes; moderate strain Δ 24.6
|
|
| T14 T14 |
|
65 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TB2021_16
well-buried hydrophobics
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes; moderate strain Δ 25.6, geometry warning, and strain ΔE = 25.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 394.1 · logP 0.21 · TPSA 106.4
|
38.6 | 0.32 | 3.3403 | -1.1333 | 4 | 25.57 | 394.1 | 0.21 | 106.4 | 4.095 | 0.73 | 0.37 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes; moderate strain Δ 25.6
|
|
| T14 T14 |
|
66 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z44305875
clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 7 clashes; 3 protein clashes, geometry warning, and strain ΔE = 18.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 297.3 · logP 2.90 · TPSA 67.8
|
36.5 | 0.25 | 3.9535 | -1.0562 | 10 | 18.87 | 297.3 | 2.90 | 67.8 | 2.112 | 0.76 | 0.35 | 0 | 0 | 0.85 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes
|
|
| T14 T14 |
|
67 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
CKP-49
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 275.3 · logP 2.63 · TPSA 58.0
|
37.3 | 0.40 | 2.8203 | -1.1382 | 10 | 15.77 | 275.3 | 2.63 | 58.0 | 3.123 | 0.67 | 0.38 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T14 T14 |
|
68 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TB2021_15
well-buried hydrophobics
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes; moderate strain Δ 24.2, geometry warning, and strain ΔE = 24.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 347.1 · logP 0.36 · TPSA 106.4
|
38.6 | 0.31 | 3.4868 | -1.1427 | 4 | 24.22 | 347.1 | 0.36 | 106.4 | 4.097 | 0.73 | 0.38 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes; moderate strain Δ 24.2
|
|
| T14 T14 |
|
69 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TB2021_77
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 302.4 · logP 4.09 · TPSA 55.7
|
42.6 | 0.49 | 1.7361 | -0.9768 | 7 | 14.45 | 302.4 | 4.09 | 55.7 | 2.346 | 0.62 | 0.30 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T14 T14 |
|
70 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_589
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 3 protein clashes, geometry warning, and strain ΔE = 19.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 236.3 · logP 1.57 · TPSA 76.0
|
42.0 | 0.47 | 2.6965 | -1.4614 | 5 | 19.39 | 236.3 | 1.57 | 76.0 | 2.649 | 0.67 | 0.36 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 4 clashes; 3 protein clashes
|
|
| T14 T14 |
|
71 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z25107406
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 327.4 · logP 0.36 · TPSA 123.7
|
41.0 | 0.35 | 3.0158 | -1.0385 | 6 | 14.99 | 327.4 | 0.36 | 123.7 | 2.702 | 0.66 | 0.44 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 2 protein clashes
|
|
| T14 T14 |
|
72 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_61
well-buried hydrophobics
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: 2 protein contact clashes; high strain Δ 46.8 and strain ΔE = 46.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 773.1 · logP 7.32 · TPSA 188.1
|
43.2 | 0.56 | 0.0546 | -0.4048 | 4 | 46.76 | 773.1 | 7.32 | 188.1 | 5.235 | 0.20 | 0.55 | 0 | 0 | 0.12 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
2 protein contact clashes; high strain Δ 46.8
|
|
| T14 T14 |
|
73 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56932065
65% of hydrophobic surface is solvent-exposed (11/17 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 4 clashes; 1 protein clash; high strain Δ 37.4, geometry warning, and strain ΔE = 37.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 376.5 · logP 1.67 · TPSA 92.0
|
40.4 | 0.53 | 1.6098 | -1.0762 | 11 | 37.36 | 376.5 | 1.67 | 92.0 | 3.622 | 0.66 | 0.50 | 0 | 0 | 0.41 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 1 protein clash; high strain Δ 37.4
|
|
| T14 T14 |
|
74 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_184
reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash; moderate strain Δ 23.3, geometry warning, and strain ΔE = 23.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 322.4 · logP 1.69 · TPSA 103.2
|
40.1 | 0.39 | 2.4780 | -0.9084 | 8 | 23.32 | 322.4 | 1.69 | 103.2 | 2.471 | 0.70 | 0.35 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash; moderate strain Δ 23.3
|
|
| T14 T14 |
|
75 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_346
reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 4 protein contact clashes, geometry warning, and strain ΔE = 18.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 401.7 · logP 4.42 · TPSA 66.4
|
39.9 | 0.56 | 0.7591 | -0.9408 | 8 | 18.43 | 401.7 | 4.42 | 66.4 | 2.567 | 0.43 | 0.37 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 4 protein contact clashes
|
|
| T14 T14 |
|
76 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2504
clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 8 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 268.3 · logP 2.37 · TPSA 52.6
|
40.6 | 0.49 | 1.7224 | -1.1066 | 16 | 15.18 | 268.3 | 2.37 | 52.6 | 2.771 | 0.76 | 0.44 | 0 | 0 | 0.90 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash
|
|
| T14 T14 |
|
77 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49549408
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes; high strain Δ 31.0, geometry warning, and strain ΔE = 31.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 278.7 · logP 2.90 · TPSA 85.1
|
40.6 | 0.41 | 3.0745 | -1.3819 | 6 | 30.96 | 278.7 | 2.90 | 85.1 | 2.263 | 0.70 | 0.37 | 0 | 0 | 0.40 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes; high strain Δ 31.0
|
|
| T14 T14 |
|
78 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0565
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 281.3 · logP 0.15 · TPSA 144.2
|
39.1 | 0.46 | 2.2419 | -1.1610 | 6 | 17.62 | 281.3 | 0.15 | 144.2 | 2.469 | 0.53 | 0.36 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T14 T14 |
|
79 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56960396
reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 315.8 · logP 3.54 · TPSA 58.9
|
39.1 | 0.37 | 3.0227 | -1.0393 | 9 | 12.71 | 315.8 | 3.54 | 58.9 | 2.415 | 0.62 | 0.33 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T14 T14 |
|
80 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z26824885
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 350.4 · logP 4.16 · TPSA 80.9
|
40.2 | 0.46 | 1.7533 | -0.9210 | 6 | 9.91 | 350.4 | 4.16 | 80.9 | 2.224 | 0.40 | 0.41 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash
|
|
| T14 T14 |
|
81 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC2_29
reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 20.1, geometry warning, and strain ΔE = 20.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 254.3 · logP 2.72 · TPSA 63.8
|
40.0 | 0.47 | 2.2062 | -1.2210 | 8 | 20.09 | 254.3 | 2.72 | 63.8 | 1.866 | 0.67 | 0.30 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 20.1
|
|
| T14 T14 |
|
82 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC409
94% of hydrophobic surface is solvent-exposed (17/18 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Good docking score, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 5 clashes; 5 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 366.5 · logP 2.92 · TPSA 91.7
|
39.0 | 0.58 | 0.6467 | -0.8939 | 17 | 17.22 | 366.5 | 2.92 | 91.7 | 3.323 | 0.58 | 0.46 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 5 protein contact clashes
|
|
| T14 T14 |
|
83 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z424903996
reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 366.8 · logP 3.99 · TPSA 79.6
|
41.2 | 0.46 | 1.8577 | -0.8455 | 9 | 11.25 | 366.8 | 3.99 | 79.6 | 2.014 | 0.58 | 0.33 | 0 | 0 | 0.71 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T14 T14 |
|
84 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z363947412
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 8 clashes; 7 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 367.8 · logP 4.53 · TPSA 59.2
|
38.0 | 0.52 | 1.1846 | -0.8542 | 10 | 12.33 | 367.8 | 4.53 | 59.2 | 2.677 | 0.43 | 0.29 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 7 protein contact clashes
|
|
| T14 T14 |
|
85 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57805337
reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 5 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 362.5 · logP 4.75 · TPSA 52.9
|
38.4 | 0.52 | 1.1792 | -0.8524 | 9 | 13.84 | 362.5 | 4.75 | 52.9 | 2.692 | 0.43 | 0.30 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 5 protein contact clashes
|
|
| T14 T14 |
|
86 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1213671382
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 7 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 308.3 · logP 3.05 · TPSA 90.9
|
38.9 | 0.50 | 1.4121 | -0.9503 | 12 | 12.57 | 308.3 | 3.05 | 90.9 | 2.340 | 0.58 | 0.28 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash
|
|
| T14 T14 |
|
87 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56836269
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 5 clashes; 2 protein clashes; moderate strain Δ 20.9, geometry warning, and strain ΔE = 20.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 340.5 · logP 3.73 · TPSA 52.8
|
38.1 | 0.35 | 2.8541 | -0.9102 | 11 | 20.85 | 340.5 | 3.73 | 52.8 | 2.355 | 0.73 | 0.35 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 2 protein clashes; moderate strain Δ 20.9
|
|
| T14 T14 |
|
88 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_1412
well-buried hydrophobics
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes; moderate strain Δ 25.0, geometry warning, and strain ΔE = 25.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 253.5 · logP 1.37 · TPSA 81.1
|
38.3 | 0.49 | 2.6568 | -1.5984 | 5 | 25.00 | 253.5 | 1.37 | 81.1 | 3.441 | 0.55 | 0.30 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 6 clashes; 2 protein clashes; moderate strain Δ 25.0
|
|
| T14 T14 |
|
89 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC271
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 20.8, geometry warning, and strain ΔE = 20.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 297.3 · logP 2.30 · TPSA 91.4
|
39.1 | 0.53 | 1.7178 | -1.2867 | 16 | 20.78 | 297.3 | 2.30 | 91.4 | 2.229 | 0.70 | 0.39 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 20.8
|
|
| T14 T14 |
|
90 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49728376
reasonable synthesis profile
DetailsWhy selected: Good docking score and good contact coverage.
Main concern: geometry warning; 9 clashes; 4 protein contact clashes; high strain Δ 36.7, geometry warning, and strain ΔE = 36.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 328.3 · logP 1.69 · TPSA 89.4
|
38.5 | 0.59 | 0.7394 | -1.0558 | 17 | 36.68 | 328.3 | 1.69 | 89.4 | 2.685 | 0.73 | 0.38 | 0 | 0 | 0.66 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 4 protein contact clashes; high strain Δ 36.7
|
|
| T14 T14 |
|
91 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49890534
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 23.9, geometry warning, and strain ΔE = 23.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 298.4 · logP 2.88 · TPSA 73.6
|
38.9 | 0.49 | 1.8103 | -1.1212 | 14 | 23.87 | 298.4 | 2.88 | 73.6 | 3.084 | 0.73 | 0.36 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 23.9
|
|
| T14 T14 |
|
92 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1213668957
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 9 clashes; 5 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 405.8 · logP 4.77 · TPSA 82.4
|
38.2 | 0.54 | 1.0110 | -0.8197 | 11 | 17.01 | 405.8 | 4.77 | 82.4 | 2.974 | 0.40 | 0.43 | 0 | 0 | 0.51 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 5 protein contact clashes
|
|
| T14 T14 |
|
93 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_47
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 337.8 · logP 3.36 · TPSA 87.6
|
37.5 | 0.29 | 3.4093 | -0.9089 | 7 | 9.48 | 337.8 | 3.36 | 87.6 | 2.664 | 0.58 | 0.36 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T14 T14 |
|
94 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
CKP-35
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 6 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 240.3 · logP 2.50 · TPSA 58.3
|
38.6 | 0.41 | 3.0687 | -1.3991 | 14 | 16.27 | 240.3 | 2.50 | 58.3 | 1.956 | 0.73 | 0.38 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes
|
|
| T14 T14 |
|
95 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_400
100% of hydrophobic surface is solvent-exposed (12/12 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 6 clashes; 2 protein clashes; moderate strain Δ 26.3, geometry warning, and strain ΔE = 26.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 288.3 · logP -0.70 · TPSA 108.3
|
37.1 | 0.45 | 2.3041 | -1.2198 | 12 | 26.33 | 288.3 | -0.70 | 108.3 | 3.420 | 0.73 | 0.29 | 0 | 0 | 0.70 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes; moderate strain Δ 26.3
|
|
| T14 T14 |
|
96 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1508915075
90% of hydrophobic surface is solvent-exposed (9/10 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 212.2 · logP -0.27 · TPSA 105.4
|
38.1 | 0.38 | 3.3915 | -1.4973 | 9 | 15.95 | 212.2 | -0.27 | 105.4 | 3.489 | 0.70 | 0.36 | 0 | 0 | 0.52 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes
|
|
| T14 T14 |
|
97 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56920485
reasonable synthesis profile
DetailsWhy selected: Good docking score and good contact coverage.
Main concern: geometry warning; 6 clashes; 1 protein clash; high strain Δ 31.4, geometry warning, and strain ΔE = 31.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 347.4 · logP 3.09 · TPSA 90.3
|
39.1 | 0.57 | 1.3490 | -1.2328 | 11 | 31.35 | 347.4 | 3.09 | 90.3 | 3.026 | 0.62 | 0.34 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; high strain Δ 31.4
|
|
| T14 T14 |
|
98 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56900756
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 22.4, geometry warning, and strain ΔE = 22.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 342.7 · logP 4.80 · TPSA 41.1
|
37.2 | 0.32 | 3.2705 | -0.9623 | 4 | 22.40 | 342.7 | 4.80 | 41.1 | 2.282 | 0.54 | 0.28 | 0 | 0 | 0.84 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 22.4
|
|
| T14 T14 |
|
99 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z27504791
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 3 protein clashes; high strain Δ 34.8, geometry warning, and strain ΔE = 34.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 400.5 · logP 1.38 · TPSA 135.0
|
36.2 | 0.17 | 4.5555 | -0.8484 | 3 | 34.82 | 400.5 | 1.38 | 135.0 | 2.593 | 0.63 | 0.51 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 3 protein clashes; high strain Δ 34.8
|
|
| T14 T14 |
|
100 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56774766
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 29.8, geometry warning, and strain ΔE = 29.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 356.5 · logP 3.86 · TPSA 43.8
|
37.3 | 0.52 | 1.6439 | -1.0127 | 12 | 29.85 | 356.5 | 3.86 | 43.8 | 2.200 | 0.59 | 0.34 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 29.8
|
|
| T14 T14 |
|
101 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56863527
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 24.6, geometry warning, and strain ΔE = 24.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 371.8 · logP 4.30 · TPSA 85.1
|
36.1 | 0.32 | 2.8355 | -0.8723 | 1 | 24.64 | 371.8 | 4.30 | 85.1 | 2.405 | 0.40 | 0.36 | 0 | 0 | 0.70 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 24.6
|
|
| T14 T14 |
|
102 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z46033750
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 24.5, geometry warning, and strain ΔE = 24.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 352.4 · logP 3.94 · TPSA 76.0
|
39.8 | 0.48 | 1.4954 | -0.8457 | 15 | 24.52 | 352.4 | 3.94 | 76.0 | 2.395 | 0.73 | 0.42 | 0 | 0 | 0.82 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 24.5
|
|
| T14 T14 |
|
103 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TbNat_137
55% of hydrophobic surface appears solvent-exposed (11/20 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 10 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 374.4 · logP 1.99 · TPSA 102.3
|
34.9 | 0.28 | 3.4903 | -0.9114 | 11 | 13.13 | 374.4 | 1.99 | 102.3 | 4.146 | 0.73 | 0.36 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes
|
|
| T14 T14 |
|
104 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z2940609369
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 271.3 · logP 2.23 · TPSA 72.7
|
38.8 | 0.28 | 3.7603 | -1.1216 | 7 | 14.27 | 271.3 | 2.23 | 72.7 | 2.818 | 0.73 | 0.38 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 3 protein clashes
|
|
| T14 T14 |
|
105 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_202
75% of hydrophobic surface is solvent-exposed (15/20 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 15 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 365.5 · logP 1.50 · TPSA 80.6
|
34.0 | 0.34 | 2.7614 | -0.8141 | 15 | 15.46 | 365.5 | 1.50 | 80.6 | 3.943 | 0.70 | 0.41 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 1 protein clash
|
|
| T14 T14 |
|
106 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_273
reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 21.0, geometry warning, and strain ΔE = 21.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 270.7 · logP 3.24 · TPSA 63.8
|
39.9 | 0.48 | 2.1682 | -1.2267 | 8 | 20.99 | 270.7 | 3.24 | 63.8 | 1.925 | 0.67 | 0.30 | 0 | 0 | 0.55 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 21.0
|
|
| T14 T14 |
|
107 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK6
clean safety profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 10 clashes; 3 protein clashes; moderate strain Δ 20.4, geometry warning, and strain ΔE = 20.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 340.4 · logP 4.49 · TPSA 58.9
|
33.7 | 0.30 | 3.7679 | -1.0976 | 15 | 20.41 | 340.4 | 4.49 | 58.9 | 3.367 | 0.76 | 0.38 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 3 protein clashes; moderate strain Δ 20.4
|
|
| T14 T14 |
|
108 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56891526
100% of hydrophobic surface is solvent-exposed (12/12 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 5 clashes; 3 protein clashes; moderate strain Δ 25.7, geometry warning, and strain ΔE = 25.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 280.3 · logP -0.53 · TPSA 92.0
|
38.8 | 0.45 | 2.9636 | -1.4479 | 12 | 25.66 | 280.3 | -0.53 | 92.0 | 3.788 | 0.70 | 0.47 | 0 | 0 | 0.44 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 3 protein clashes; moderate strain Δ 25.7
|
|
| T14 T14 |
|
109 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TB2021_76
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 303.4 · logP 2.51 · TPSA 67.7
|
42.5 | 0.48 | 1.7367 | -0.9488 | 7 | 13.83 | 303.4 | 2.51 | 67.7 | 2.507 | 0.62 | 0.30 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T14 T14 |
|
110 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57061994
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 10 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 292.4 · logP 1.75 · TPSA 70.6
|
34.1 | 0.30 | 3.6595 | -1.1148 | 13 | 17.59 | 292.4 | 1.75 | 70.6 | 2.759 | 0.70 | 0.44 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 10 clashes; 3 protein clashes
|
|
| T14 T14 |
|
111 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1162463429
100% of hydrophobic surface is solvent-exposed (10/10 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 5 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 242.2 · logP -1.51 · TPSA 104.5
|
34.3 | 0.27 | 4.1640 | -1.2924 | 10 | 15.84 | 242.2 | -1.51 | 104.5 | 3.376 | 0.73 | 0.22 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 3 protein clashes
|
|
| T14 T14 |
|
112 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z46095090
clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 10 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 282.3 · logP 3.06 · TPSA 55.8
|
37.9 | 0.40 | 2.5855 | -1.0843 | 16 | 15.39 | 282.3 | 3.06 | 55.8 | 2.176 | 0.76 | 0.36 | 0 | 0 | 0.86 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash
|
|
| T14 T14 |
|
113 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45956789
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 10 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 326.2 · logP 4.87 · TPSA 33.1
|
37.4 | 0.41 | 2.4549 | -1.1376 | 16 | 8.67 | 326.2 | 4.87 | 33.1 | 2.252 | 0.73 | 0.33 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes
|
|
| T14 T14 |
|
114 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_143
50% of hydrophobic surface appears solvent-exposed (8/16 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes; high strain Δ 52.0, geometry warning, and strain ΔE = 52.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 302.4 · logP -0.56 · TPSA 88.8
|
32.6 | 0.34 | 3.2177 | -1.0657 | 8 | 51.97 | 302.4 | -0.56 | 88.8 | 4.002 | 0.73 | 0.24 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes; high strain Δ 52.0
|
|
| T14 T14 |
|
115 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45800144
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 308.4 · logP 3.18 · TPSA 38.2
|
33.1 | 0.24 | 3.9759 | -0.9937 | 5 | 14.04 | 308.4 | 3.18 | 38.2 | 2.847 | 0.55 | 0.30 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 10 clashes; 3 protein clashes
|
|
| T14 T14 |
|
116 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z46108264
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 13 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 317.3 · logP 4.13 · TPSA 70.4
|
34.1 | 0.22 | 4.3439 | -0.9864 | 14 | 16.70 | 317.3 | 4.13 | 70.4 | 2.226 | 0.73 | 0.41 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 3 protein clashes
|
|
| T14 T14 |
|
117 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z46031461
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 13 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 298.3 · logP 4.53 · TPSA 37.3
|
34.0 | 0.23 | 4.2454 | -1.0774 | 15 | 11.45 | 298.3 | 4.53 | 37.3 | 1.906 | 0.73 | 0.41 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 3 protein clashes
|
|
| T14 T14 |
|
118 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
CKP-28
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 300.4 · logP 3.75 · TPSA 45.1
|
36.1 | 0.49 | 1.8816 | -1.0563 | 13 | 16.23 | 300.4 | 3.75 | 45.1 | 2.740 | 0.55 | 0.36 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T14 T14 |
|
119 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z44495828
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; high strain Δ 59.9, geometry warning, and strain ΔE = 59.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 350.8 · logP 3.59 · TPSA 90.7
|
33.4 | 0.34 | 3.1786 | -0.9745 | 4 | 59.88 | 350.8 | 3.59 | 90.7 | 2.741 | 0.58 | 0.28 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; high strain Δ 59.9
|
|
| T14 T14 |
|
120 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK29
clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 11 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 342.4 · logP 4.31 · TPSA 69.9
|
33.6 | 0.21 | 4.1855 | -0.9159 | 15 | 11.65 | 342.4 | 4.31 | 69.9 | 2.737 | 0.76 | 0.42 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 3 protein clashes
|
|
| T14 T14 |
|
121 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1501485351
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash; high strain Δ 38.6, geometry warning, and strain ΔE = 38.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 365.8 · logP 2.66 · TPSA 96.0
|
39.7 | 0.46 | 2.0320 | -0.9178 | 7 | 38.62 | 365.8 | 2.66 | 96.0 | 3.153 | 0.62 | 0.39 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash; high strain Δ 38.6
|
|
| T14 T14 |
|
122 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57018794
reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 351.2 · logP 4.59 · TPSA 76.2
|
38.9 | 0.47 | 1.6924 | -0.9563 | 8 | 13.88 | 351.2 | 4.59 | 76.2 | 2.693 | 0.51 | 0.31 | 0 | 0 | 0.70 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash
|
|
| T14 T14 |
|
123 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1521553711
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 10 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 305.8 · logP 2.73 · TPSA 72.7
|
39.5 | 0.38 | 2.7702 | -1.0811 | 10 | 13.10 | 305.8 | 2.73 | 72.7 | 3.055 | 0.62 | 0.52 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes
|
|
| T14 T14 |
|
124 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY1020
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash; high strain Δ 42.2, geometry warning, and strain ΔE = 42.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 310.3 · logP 0.30 · TPSA 119.7
|
38.5 | 0.47 | 1.9315 | -1.0521 | 6 | 42.17 | 310.3 | 0.30 | 119.7 | 3.048 | 0.67 | 0.41 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 10 clashes; 1 protein clash; high strain Δ 42.2
|
|
| T14 T14 |
|
125 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z17465528
reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 362.5 · logP 3.28 · TPSA 73.8
|
37.2 | 0.35 | 3.1301 | -0.9738 | 9 | 16.36 | 362.5 | 3.28 | 73.8 | 3.199 | 0.62 | 0.36 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 3 protein clashes
|
|
| T14 T14 |
|
126 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z44089721
53% of hydrophobic surface appears solvent-exposed (10/19 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 11 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 291.4 · logP 2.08 · TPSA 37.6
|
37.1 | 0.28 | 4.2119 | -1.2332 | 10 | 17.74 | 291.4 | 2.08 | 37.6 | 3.756 | 0.73 | 0.50 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 3 protein clashes
|
|
| T14 T14 |
|
127 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z167105928
reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 28.5, geometry warning, and strain ΔE = 28.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 353.5 · logP 3.06 · TPSA 72.7
|
39.3 | 0.46 | 1.8985 | -0.9442 | 9 | 28.52 | 353.5 | 3.06 | 72.7 | 2.269 | 0.62 | 0.32 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 28.5
|
|
| T14 T14 |
|
128 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_ACDS_69
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 10 clashes; 6 protein contact clashes; moderate strain Δ 29.1, geometry warning, and strain ΔE = 29.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 407.4 · logP 2.12 · TPSA 132.4
|
37.3 | 0.50 | 1.3531 | -0.8459 | 14 | 29.07 | 407.4 | 2.12 | 132.4 | 2.529 | 0.52 | 0.53 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 6 protein contact clashes; moderate strain Δ 29.1
|
|
| T14 T14 |
|
129 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z29294093
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 9 clashes; 2 protein clashes; very favorable intra outlier; high strain Δ 32.6, geometry warning, and strain ΔE = 32.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 491.6 · logP 2.75 · TPSA 122.3
|
36.1 | 0.41 | 3.1787 | -0.7324 | 15 | 32.56 | 491.6 | 2.75 | 122.3 | 3.193 | 0.55 | 0.48 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes; very favorable intra outlier; high strain Δ 32.6
|
|
| T14 T14 |
|
130 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z19651549
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 23.4, geometry warning, and strain ΔE = 23.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 301.3 · logP 3.21 · TPSA 83.6
|
37.3 | 0.43 | 2.6353 | -1.2043 | 15 | 23.43 | 301.3 | 3.21 | 83.6 | 2.149 | 0.70 | 0.39 | 0 | 0 | 0.44 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 23.4
|
|
| T14 T14 |
|
131 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_217
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 11 clashes; 1 protein clash, geometry warning, and strain ΔE = 19.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 308.4 · logP 2.15 · TPSA 94.0
|
37.5 | 0.46 | 2.1061 | -1.0030 | 13 | 19.93 | 308.4 | 2.15 | 94.0 | 2.531 | 0.58 | 0.33 | 0 | 0 | 0.77 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash
|
|
| T14 T14 |
|
132 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_98
82% of hydrophobic surface is solvent-exposed (14/17 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 4 clashes; 1 protein clash; high strain Δ 45.8, geometry warning, and strain ΔE = 45.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 370.5 · logP 1.83 · TPSA 114.1
|
35.2 | 0.47 | 1.8513 | -0.9202 | 14 | 45.80 | 370.5 | 1.83 | 114.1 | 4.287 | 0.70 | 0.45 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 1 protein clash; high strain Δ 45.8
|
|
| T14 T14 |
|
133 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_3
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 363.4 · logP 2.73 · TPSA 106.0
|
38.8 | 0.41 | 2.5978 | -0.9357 | 10 | 14.40 | 363.4 | 2.73 | 106.0 | 2.611 | 0.58 | 0.37 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash
|
|
| T14 T14 |
|
134 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_167
68% of hydrophobic surface is solvent-exposed (13/19 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 8 clashes; 2 protein clashes; high strain Δ 30.6, geometry warning, and strain ΔE = 30.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 352.4 · logP 1.94 · TPSA 84.4
|
35.2 | 0.37 | 2.7851 | -0.9177 | 13 | 30.64 | 352.4 | 1.94 | 84.4 | 3.959 | 0.70 | 0.44 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes; high strain Δ 30.6
|
|
| T14 T14 |
|
135 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56765438
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 324.3 · logP 3.45 · TPSA 87.6
|
34.8 | 0.39 | 2.8079 | -1.0264 | 15 | 10.13 | 324.3 | 3.45 | 87.6 | 2.842 | 0.58 | 0.32 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T14 T14 |
|
136 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_MAC_44
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 26.7, geometry warning, and strain ΔE = 26.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 283.3 · logP 1.46 · TPSA 110.9
|
35.4 | 0.26 | 4.0469 | -1.1088 | 7 | 26.71 | 283.3 | 1.46 | 110.9 | 2.406 | 0.63 | 0.54 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 26.7
|
|
| T14 T14 |
|
137 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49732247
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 12 clashes; 3 protein clashes; moderate strain Δ 24.4, geometry warning, and strain ΔE = 24.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 311.3 · logP 1.70 · TPSA 107.9
|
36.2 | 0.29 | 4.0384 | -1.1947 | 10 | 24.42 | 311.3 | 1.70 | 107.9 | 2.498 | 0.70 | 0.40 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 3 protein clashes; moderate strain Δ 24.4
|
|
| T14 T14 |
|
138 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49547459
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 11 clashes; 3 protein clashes; moderate strain Δ 20.4, geometry warning, and strain ΔE = 20.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 271.3 · logP 1.56 · TPSA 83.8
|
34.6 | 0.24 | 4.3923 | -1.1823 | 13 | 20.43 | 271.3 | 1.56 | 83.8 | 2.084 | 0.73 | 0.36 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 3 protein clashes; moderate strain Δ 20.4
|
|
| T14 T14 |
|
139 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1530532754
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 12 clashes; 5 protein contact clashes; moderate strain Δ 21.2, geometry warning, and strain ΔE = 21.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 404.0 · logP 3.94 · TPSA 30.0
|
32.8 | 0.48 | 1.4499 | -0.8103 | 21 | 21.17 | 404.0 | 3.94 | 30.0 | 2.279 | 0.58 | 0.32 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 5 protein contact clashes; moderate strain Δ 21.2
|
|
| T14 T14 |
|
140 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z44877509
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 25.9, geometry warning, and strain ΔE = 25.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 326.3 · logP 2.45 · TPSA 90.6
|
35.2 | 0.32 | 3.2622 | -1.0159 | 7 | 25.93 | 326.3 | 2.45 | 90.6 | 2.764 | 0.50 | 0.42 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 25.9
|
|
| T14 T14 |
|
141 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_49
reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 317.4 · logP 2.91 · TPSA 87.6
|
38.2 | 0.35 | 2.9987 | -0.9392 | 9 | 11.81 | 317.4 | 2.91 | 87.6 | 2.533 | 0.58 | 0.38 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes
|
|
| T14 T14 |
|
142 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_1
well-buried hydrophobics
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 22.7, geometry warning, and strain ΔE = 22.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 464.4 · logP 3.89 · TPSA 63.0
|
33.1 | 0.31 | 3.1866 | -0.7972 | 7 | 22.66 | 464.4 | 3.89 | 63.0 | 4.256 | 0.50 | 0.36 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 22.7
|
|
| T14 T14 |
|
143 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z18499260
100% of hydrophobic surface is solvent-exposed (12/12 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 4 clashes; 3 protein clashes; high strain Δ 30.7, geometry warning, and strain ΔE = 30.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 265.3 · logP 1.23 · TPSA 76.6
|
35.8 | 0.38 | 3.1790 | -1.3210 | 12 | 30.74 | 265.3 | 1.23 | 76.6 | 3.526 | 0.73 | 0.37 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 3 protein clashes; high strain Δ 30.7
|
|
| T14 T14 |
|
144 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_272
reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 270.7 · logP 3.24 · TPSA 63.8
|
40.1 | 0.46 | 2.2701 | -1.1810 | 8 | 17.15 | 270.7 | 3.24 | 63.8 | 1.860 | 0.67 | 0.30 | 0 | 0 | 0.55 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 10 clashes; 1 protein clash
|
|
| T14 T14 |
|
145 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z46095146
clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 8 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 268.3 · logP 2.76 · TPSA 66.8
|
39.1 | 0.45 | 2.4337 | -1.2978 | 16 | 16.96 | 268.3 | 2.76 | 66.8 | 2.272 | 0.76 | 0.44 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes
|
|
| T14 T14 |
|
146 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC234
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 12 clashes; 7 protein contact clashes; high strain Δ 44.8, geometry warning, and strain ΔE = 44.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 371.5 · logP 1.99 · TPSA 83.8
|
32.5 | 0.48 | 1.7026 | -0.9082 | 19 | 44.77 | 371.5 | 1.99 | 83.8 | 2.896 | 0.70 | 0.32 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 7 protein contact clashes; high strain Δ 44.8
|
|
| T14 T14 |
|
147 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z27550258
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 385.4 · logP 4.45 · TPSA 75.4
|
36.5 | 0.37 | 2.4660 | -0.8072 | 7 | 12.35 | 385.4 | 4.45 | 75.4 | 2.035 | 0.40 | 0.38 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash
|
|
| T14 T14 |
|
148 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TB2021_75
73% of hydrophobic surface is solvent-exposed (16/22 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 9 clashes; 4 protein contact clashes; moderate strain Δ 24.8, geometry warning, and strain ΔE = 24.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 369.5 · logP 2.86 · TPSA 86.9
|
35.8 | 0.52 | 0.9876 | -0.7817 | 16 | 24.79 | 369.5 | 2.86 | 86.9 | 3.481 | 0.58 | 0.40 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 4 protein contact clashes; moderate strain Δ 24.8
|
|
| T14 T14 |
|
149 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49719002
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 7 clashes; 3 protein clashes; moderate strain Δ 24.5, geometry warning, and strain ΔE = 24.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 280.7 · logP 1.69 · TPSA 110.9
|
36.3 | 0.34 | 3.9655 | -1.5295 | 11 | 24.54 | 280.7 | 1.69 | 110.9 | 2.708 | 0.70 | 0.45 | 0 | 0 | 0.39 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes; moderate strain Δ 24.5
|
|
| T14 T14 |
|
150 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57329641
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 4 clashes; 2 protein clashes; moderate strain Δ 29.0, geometry warning, and strain ΔE = 29.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 300.3 · logP 1.77 · TPSA 99.6
|
34.6 | 0.31 | 3.3750 | -1.0219 | 12 | 28.99 | 300.3 | 1.77 | 99.6 | 2.518 | 0.73 | 0.33 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 2 protein clashes; moderate strain Δ 29.0
|
|
| T14 T14 |
|
151 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC1_154
67% of hydrophobic surface is solvent-exposed (12/18 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 29.2, geometry warning, and strain ΔE = 29.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 393.8 · logP 1.81 · TPSA 100.6
|
35.3 | 0.39 | 2.6112 | -0.9639 | 12 | 29.18 | 393.8 | 1.81 | 100.6 | 3.697 | 0.70 | 0.36 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 29.2
|
|
| T14 T14 |
|
152 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_64
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 11 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 418.5 · logP 3.13 · TPSA 77.3
|
31.2 | 0.30 | 3.1415 | -0.7409 | 18 | 9.33 | 418.5 | 3.13 | 77.3 | 2.114 | 0.55 | 0.37 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes
|
|
| T14 T14 |
|
153 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z28134909
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 16 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 339.4 · logP 4.86 · TPSA 54.9
|
33.6 | 0.30 | 3.2851 | -0.8655 | 17 | 12.94 | 339.4 | 4.86 | 54.9 | 1.809 | 0.62 | 0.41 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 16 clashes; 2 protein clashes
|
|
| T14 T14 |
|
154 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC270
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 8 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 281.3 · logP 2.60 · TPSA 71.2
|
34.8 | 0.32 | 3.6822 | -1.2496 | 16 | 13.59 | 281.3 | 2.60 | 71.2 | 2.084 | 0.73 | 0.38 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 3 protein clashes
|
|
| T14 T14 |
|
155 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_164
reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash, geometry warning, and strain ΔE = 19.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 337.4 · logP 2.44 · TPSA 106.8
|
38.1 | 0.40 | 2.3027 | -0.9153 | 8 | 19.00 | 337.4 | 2.44 | 106.8 | 2.764 | 0.58 | 0.34 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T14 T14 |
|
156 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z235511374
reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 23.7, geometry warning, and strain ΔE = 23.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 331.4 · logP 3.44 · TPSA 75.1
|
38.4 | 0.42 | 2.3176 | -0.9930 | 9 | 23.67 | 331.4 | 3.44 | 75.1 | 2.294 | 0.58 | 0.36 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 23.7
|
|
| T14 T14 |
|
157 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49891479
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 27.0, geometry warning, and strain ΔE = 27.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 340.4 · logP 3.34 · TPSA 79.6
|
38.6 | 0.46 | 1.8222 | -0.9489 | 11 | 26.98 | 340.4 | 3.34 | 79.6 | 2.479 | 0.58 | 0.46 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 27.0
|
|
| T14 T14 |
|
158 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z126938572
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 28.1, geometry warning, and strain ΔE = 28.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 351.4 · logP 2.82 · TPSA 67.3
|
36.1 | 0.41 | 2.1824 | -0.8508 | 14 | 28.05 | 351.4 | 2.82 | 67.3 | 2.032 | 0.62 | 0.39 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 28.1
|
|
| T14 T14 |
|
159 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK178
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 10 clashes; 1 protein clash; high strain Δ 37.8, geometry warning, and strain ΔE = 37.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 383.5 · logP 1.19 · TPSA 96.2
|
35.9 | 0.39 | 2.6328 | -0.9115 | 12 | 37.77 | 383.5 | 1.19 | 96.2 | 2.535 | 0.70 | 0.36 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash; high strain Δ 37.8
|
|
| T14 T14 |
|
160 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z64375248
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 7 clashes; 2 protein clashes, geometry warning, and strain ΔE = 19.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 303.7 · logP 3.44 · TPSA 94.5
|
36.2 | 0.45 | 2.6106 | -1.2996 | 15 | 19.34 | 303.7 | 3.44 | 94.5 | 2.711 | 0.62 | 0.36 | 0 | 0 | 0.39 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes
|
|
| T14 T14 |
|
161 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_191
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 387.5 · logP 3.51 · TPSA 93.3
|
36.1 | 0.33 | 3.3422 | -0.9737 | 12 | 16.18 | 387.5 | 3.51 | 93.3 | 2.332 | 0.58 | 0.43 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T14 T14 |
|
162 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_376
42% of hydrophobic surface appears solvent-exposed (8/19 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 15 clashes; 1 protein clash; moderate strain Δ 20.1, geometry warning, and strain ΔE = 20.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 350.5 · logP 2.08 · TPSA 108.1
|
36.5 | 0.37 | 2.5616 | -0.8518 | 8 | 20.12 | 350.5 | 2.08 | 108.1 | 3.997 | 0.58 | 0.37 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 1 protein clash; moderate strain Δ 20.1
|
|
| T14 T14 |
|
163 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC1_13
57% of hydrophobic surface appears solvent-exposed (12/21 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 24.8, geometry warning, and strain ΔE = 24.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 358.4 · logP 2.66 · TPSA 66.0
|
36.1 | 0.41 | 2.1981 | -0.8113 | 12 | 24.82 | 358.4 | 2.66 | 66.0 | 3.444 | 0.62 | 0.40 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 24.8
|
|
| T14 T14 |
|
164 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0542
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 1 protein clash; high strain Δ 49.2, geometry warning, and strain ΔE = 49.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 337.4 · logP -0.02 · TPSA 179.1
|
37.9 | 0.45 | 1.9905 | -1.0452 | 8 | 49.17 | 337.4 | -0.02 | 179.1 | 2.317 | 0.60 | 0.48 | 0 | 0 | 0.52 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash; high strain Δ 49.2
|
|
| T14 T14 |
|
165 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57907392
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 26.1, geometry warning, and strain ΔE = 26.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 395.5 · logP 3.70 · TPSA 78.5
|
37.8 | 0.44 | 1.9076 | -0.7975 | 10 | 26.08 | 395.5 | 3.70 | 78.5 | 2.985 | 0.58 | 0.37 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 26.1
|
|
| T14 T14 |
|
166 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z26395673
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 12 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 332.4 · logP 3.25 · TPSA 75.1
|
36.6 | 0.32 | 3.1776 | -0.9283 | 12 | 10.39 | 332.4 | 3.25 | 75.1 | 2.023 | 0.58 | 0.44 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 2 protein clashes
|
|
| T14 T14 |
|
167 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_115
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 15 clashes; 5 protein contact clashes, geometry warning, and strain ΔE = 19.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 445.6 · logP 2.33 · TPSA 72.9
|
36.0 | 0.40 | 1.8806 | -0.6676 | 15 | 19.22 | 445.6 | 2.33 | 72.9 | 3.055 | 0.62 | 0.50 | 0 | 0 | 0.50 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 5 protein contact clashes
|
|
| T14 T14 |
|
168 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z44426076
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 18 clashes; 7 protein contact clashes; moderate strain Δ 20.2, geometry warning, and strain ΔE = 20.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 380.8 · logP 3.31 · TPSA 92.3
|
35.1 | 0.39 | 2.3120 | -0.8371 | 14 | 20.19 | 380.8 | 3.31 | 92.3 | 2.391 | 0.58 | 0.37 | 0 | 0 | 0.70 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 18 clashes; 7 protein contact clashes; moderate strain Δ 20.2
|
|
| T14 T14 |
|
169 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_3174
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 26.2, geometry warning, and strain ΔE = 26.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 261.7 · logP 1.15 · TPSA 94.5
|
34.7 | 0.39 | 2.9677 | -1.2159 | 10 | 26.25 | 261.7 | 1.15 | 94.5 | 2.653 | 0.63 | 0.29 | 0 | 0 | 0.53 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 26.2
|
|
| T14 T14 |
|
170 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_52
reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 329.4 · logP 3.72 · TPSA 90.7
|
34.7 | 0.28 | 3.4563 | -0.8847 | 9 | 13.03 | 329.4 | 3.72 | 90.7 | 2.031 | 0.58 | 0.24 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 2 protein clashes
|
|
| T14 T14 |
|
171 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Babesia_59
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 371.4 · logP 2.53 · TPSA 103.8
|
34.4 | 0.34 | 2.9165 | -0.8589 | 13 | 12.31 | 371.4 | 2.53 | 103.8 | 2.915 | 0.58 | 0.36 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash
|
|
| T14 T14 |
|
172 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z14116972
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 3 protein clashes; high strain Δ 50.9, geometry warning, and strain ΔE = 50.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 400.5 · logP 2.99 · TPSA 107.6
|
32.8 | 0.26 | 3.7101 | -0.8819 | 6 | 50.87 | 400.5 | 2.99 | 107.6 | 2.728 | 0.62 | 0.40 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 3 protein clashes; high strain Δ 50.9
|
|
| T14 T14 |
|
173 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z2235487241
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 8 clashes; 3 protein clashes; moderate strain Δ 20.6, geometry warning, and strain ΔE = 20.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 317.8 · logP 3.81 · TPSA 69.6
|
33.6 | 0.31 | 3.6148 | -1.0927 | 17 | 20.60 | 317.8 | 3.81 | 69.6 | 2.241 | 0.65 | 0.47 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 3 protein clashes; moderate strain Δ 20.6
|
|
| T14 T14 |
|
174 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TbNat_133
67% of hydrophobic surface is solvent-exposed (12/18 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 22.4, geometry warning, and strain ΔE = 22.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 344.3 · logP 2.08 · TPSA 106.2
|
32.3 | 0.26 | 3.6189 | -0.9329 | 12 | 22.36 | 344.3 | 2.08 | 106.2 | 4.172 | 0.73 | 0.34 | 0 | 0 | 0.82 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 22.4
|
|
| T14 T14 |
|
175 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z27434474
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash; high strain Δ 46.0, geometry warning, and strain ΔE = 46.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 438.3 · logP 4.12 · TPSA 87.6
|
31.8 | 0.38 | 2.3885 | -0.8919 | 7 | 45.98 | 438.3 | 4.12 | 87.6 | 2.831 | 0.43 | 0.37 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash; high strain Δ 46.0
|
|
| T14 T14 |
|
176 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_99
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 13 clashes; 9 protein contact clashes; high strain Δ 39.6, geometry warning, and strain ΔE = 39.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 415.5 · logP 1.91 · TPSA 106.5
|
36.0 | 0.40 | 2.1531 | -0.7694 | 11 | 39.58 | 415.5 | 1.91 | 106.5 | 2.522 | 0.66 | 0.37 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 9 protein contact clashes; high strain Δ 39.6
|
|
| T14 T14 |
|
177 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_211
Hydrophobic burial looks adequate: 35% exposed (8/23 atoms). No penalty flagged.
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; high strain Δ 33.1, geometry warning, and strain ΔE = 33.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 375.5 · logP 2.76 · TPSA 60.6
|
31.7 | 0.23 | 3.8234 | -0.8272 | 8 | 33.11 | 375.5 | 2.76 | 60.6 | 3.792 | 0.65 | 0.33 | 0 | 0 | 0.87 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; high strain Δ 33.1
|
|
| T14 T14 |
|
178 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57676781
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 7 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 379.3 · logP 4.77 · TPSA 56.2
|
30.7 | 0.35 | 2.8233 | -0.9451 | 15 | 8.27 | 379.3 | 4.77 | 56.2 | 2.850 | 0.43 | 0.32 | 0 | 0 | 0.66 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes
|
|
| T14 T14 |
|
179 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z30879420
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 13 clashes; 2 protein clashes; moderate strain Δ 21.4, geometry warning, and strain ΔE = 21.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 348.4 · logP 3.21 · TPSA 64.0
|
33.1 | 0.29 | 3.5489 | -0.9215 | 15 | 21.38 | 348.4 | 3.21 | 64.0 | 1.988 | 0.62 | 0.39 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 2 protein clashes; moderate strain Δ 21.4
|
|
| T14 T14 |
|
180 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_41
77% of hydrophobic surface is solvent-exposed (17/22 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 17 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 376.4 · logP 3.72 · TPSA 69.7
|
30.6 | 0.33 | 3.2297 | -0.8764 | 17 | 16.70 | 376.4 | 3.72 | 69.7 | 3.793 | 0.62 | 0.32 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 17 clashes; 2 protein clashes
|
|
| T14 T14 |
|
181 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57176222
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 3 protein clashes; moderate strain Δ 21.6, geometry warning, and strain ΔE = 21.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 302.2 · logP 1.94 · TPSA 131.4
|
37.7 | 0.32 | 4.0940 | -1.3032 | 9 | 21.57 | 302.2 | 1.94 | 131.4 | 2.911 | 0.66 | 0.44 | 0 | 0 | 0.43 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 3 protein clashes; moderate strain Δ 21.6
|
|
| T14 T14 |
|
182 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z126938578
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 24.3, geometry warning, and strain ΔE = 24.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 365.4 · logP 2.54 · TPSA 76.6
|
35.8 | 0.42 | 2.1975 | -0.8727 | 14 | 24.33 | 365.4 | 2.54 | 76.6 | 2.212 | 0.58 | 0.37 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 24.3
|
|
| T14 T14 |
|
183 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56911531
60% of hydrophobic surface is solvent-exposed (9/15 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 3 protein clashes; high strain Δ 30.8, geometry warning, and strain ΔE = 30.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 348.4 · logP 0.89 · TPSA 92.0
|
37.8 | 0.36 | 3.5413 | -1.2114 | 9 | 30.83 | 348.4 | 0.89 | 92.0 | 3.601 | 0.66 | 0.49 | 0 | 0 | 0.42 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 3 protein clashes; high strain Δ 30.8
|
|
| T14 T14 |
|
184 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56831485
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 12 clashes; 4 protein contact clashes; moderate strain Δ 29.4, geometry warning, and strain ΔE = 29.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 461.0 · logP 5.64 · TPSA 75.3
|
30.4 | 0.47 | 1.3244 | -0.7433 | 14 | 29.36 | 461.0 | 5.64 | 75.3 | 2.175 | 0.17 | 0.51 | 0 | 0 | 0.52 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 4 protein contact clashes; moderate strain Δ 29.4
|
|
| T14 T14 |
|
185 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC487
73% of hydrophobic surface is solvent-exposed (16/22 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 22.8, geometry warning, and strain ΔE = 22.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 427.5 · logP 3.96 · TPSA 100.6
|
32.4 | 0.36 | 2.7503 | -0.8808 | 16 | 22.82 | 427.5 | 3.96 | 100.6 | 3.829 | 0.66 | 0.40 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 22.8
|
|
| T14 T14 |
|
186 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC275
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 20.0, geometry warning, and strain ΔE = 20.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 299.3 · logP 2.74 · TPSA 71.2
|
37.7 | 0.44 | 2.6324 | -1.3072 | 16 | 20.02 | 299.3 | 2.74 | 71.2 | 2.156 | 0.73 | 0.40 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 20.0
|
|
| T14 T14 |
|
187 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56792679
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 9 clashes; 3 protein clashes; moderate strain Δ 23.9, geometry warning, and strain ΔE = 23.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 283.3 · logP 2.41 · TPSA 83.1
|
30.8 | 0.21 | 4.3321 | -1.0633 | 14 | 23.94 | 283.3 | 2.41 | 83.1 | 2.725 | 0.70 | 0.34 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 3 protein clashes; moderate strain Δ 23.9
|
|
| T14 T14 |
|
188 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_335
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 9 clashes; 2 protein clashes; high strain Δ 43.9, geometry warning, and strain ΔE = 43.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 300.3 · logP 0.85 · TPSA 89.8
|
33.7 | 0.34 | 3.1934 | -1.0322 | 15 | 43.95 | 300.3 | 0.85 | 89.8 | 2.174 | 0.73 | 0.39 | 0 | 0 | 0.80 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes; high strain Δ 43.9
|
|
| T14 T14 |
|
189 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_46
38% of hydrophobic surface appears solvent-exposed (9/24 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash; moderate strain Δ 25.3, geometry warning, and strain ΔE = 25.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 478.4 · logP 3.61 · TPSA 72.2
|
34.5 | 0.41 | 2.2675 | -0.7554 | 9 | 25.32 | 478.4 | 3.61 | 72.2 | 4.400 | 0.50 | 0.37 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash; moderate strain Δ 25.3
|
|
| T14 T14 |
|
190 | 6 Front 6 |
Binding
Weak
Geometry
Bad
Data
Complete
Action
Reject
|
MK23
well-buried hydrophobics
DetailsWhy selected: partial native-contact recall and well-buried hydrophobics.
Main concern: geometry warning; 15 clashes; 3 protein clashes; high strain Δ 34.8, geometry warning, and strain ΔE = 34.8 kcal/mol.
Action: Reject this pose unless there is a compelling external reason to rescue the chemotype.
MW 516.7 · logP 2.33 · TPSA 89.4
|
28.8 | 0.12 | 4.7265 | -0.6917 | 7 | 34.81 | 516.7 | 2.33 | 89.4 | 3.549 | 0.55 | 0.43 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 3 protein clashes; high strain Δ 34.8
|
|
| T14 T14 |
|
191 | 6 Front 6 |
Binding
Weak
Geometry
Bad
Data
Complete
Action
Reject
|
OHD_TbNat_145
70% of hydrophobic surface is solvent-exposed (16/23 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: good contact coverage.
Main concern: geometry warning; 14 clashes; 3 protein clashes and geometry warning.
Action: Reject this pose unless there is a compelling external reason to rescue the chemotype.
MW 364.5 · logP 3.80 · TPSA 66.3
|
27.2 | 0.21 | 4.6036 | -0.9659 | 16 | 17.57 | 364.5 | 3.80 | 66.3 | 4.048 | 0.62 | 0.29 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 3 protein clashes
|
|
| T14 T14 |
|
192 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC1_150
67% of hydrophobic surface is solvent-exposed (12/18 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 7 clashes; 3 protein clashes; high strain Δ 32.2, geometry warning, and strain ΔE = 32.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 375.8 · logP 1.67 · TPSA 100.6
|
33.9 | 0.35 | 3.2721 | -1.0750 | 12 | 32.23 | 375.8 | 1.67 | 100.6 | 3.534 | 0.70 | 0.36 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes; high strain Δ 32.2
|
|
| T14 T14 |
|
193 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_301
79% of hydrophobic surface is solvent-exposed (22/28 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 13 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 412.6 · logP 3.99 · TPSA 45.9
|
25.9 | 0.39 | 2.3742 | -0.7619 | 22 | 16.98 | 412.6 | 3.99 | 45.9 | 4.900 | 0.55 | 0.41 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 13 clashes; 1 protein clash
|
|
| T14 T14 |
|
194 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z19316194
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 29.5, geometry warning, and strain ΔE = 29.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 353.4 · logP 2.77 · TPSA 73.3
|
37.4 | 0.37 | 2.7562 | -0.9098 | 10 | 29.46 | 353.4 | 2.77 | 73.3 | 2.116 | 0.62 | 0.42 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 29.5
|
|
| T14 T14 |
|
195 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z44305068
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 6 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 400.8 · logP 3.74 · TPSA 102.4
|
36.7 | 0.39 | 2.3738 | -0.9130 | 11 | 15.50 | 400.8 | 3.74 | 102.4 | 2.336 | 0.58 | 0.37 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash
|
|
| T14 T14 |
|
196 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_88
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 3 protein clashes, geometry warning, and strain ΔE = 19.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 368.5 · logP 3.48 · TPSA 86.9
|
34.9 | 0.25 | 3.7543 | -0.8909 | 8 | 19.33 | 368.5 | 3.48 | 86.9 | 2.475 | 0.58 | 0.40 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes
|
|
| T14 T14 |
|
197 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_169
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 24.6, geometry warning, and strain ΔE = 24.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 425.5 · logP 3.31 · TPSA 108.1
|
34.4 | 0.39 | 2.2393 | -0.7678 | 16 | 24.55 | 425.5 | 3.31 | 108.1 | 2.209 | 0.58 | 0.44 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 24.6
|
|
| T14 T14 |
|
198 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45635483
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 22.8, geometry warning, and strain ΔE = 22.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 368.5 · logP 2.43 · TPSA 106.3
|
34.5 | 0.37 | 2.8595 | -0.9832 | 16 | 22.83 | 368.5 | 2.43 | 106.3 | 1.935 | 0.62 | 0.41 | 0 | 0 | 0.86 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 22.8
|
|
| T14 T14 |
|
199 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z24314037
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 8 clashes; 1 protein clash; high strain Δ 30.7, geometry warning, and strain ΔE = 30.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 440.5 · logP 2.46 · TPSA 96.7
|
36.4 | 0.42 | 1.9651 | -0.7119 | 11 | 30.68 | 440.5 | 2.46 | 96.7 | 2.921 | 0.55 | 0.44 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash; high strain Δ 30.7
|
|
| T14 T14 |
|
200 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_MV-22
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 13 clashes; 3 protein clashes; high strain Δ 32.6, geometry warning, and strain ΔE = 32.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 369.4 · logP 0.33 · TPSA 108.3
|
31.6 | 0.18 | 4.3361 | -0.8142 | 12 | 32.56 | 369.4 | 0.33 | 108.3 | 2.938 | 0.70 | 0.45 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 3 protein clashes; high strain Δ 32.6
|
Score composition ▼ show
Docking 28% · final rank, interaction-normalized score, raw docking score
Burial 18% · absolute exposed hydrophobic atom count (lower is better)
Strain 14% · strain delta, intra score, geometry sanity
Safety / ADMET 18% · ADMET score with hERG/AMES/DILI/bioaccumulation penalties — Pareto objective
Ecotoxicology 9% · fish/daphnia/algae LC50 classes + bioaccumulation + persistence — Pareto objective
Synthesis 10% · SA score when available, otherwise Fsp3 proxy
Native similarity 12% · contact and H-bond recall when a native reference exists
Diversity shortlist 0% · cached shortlist already includes the novelty-aware selection step
How ranking works: Pareto fronts are built from six default objectives — docking score, ligand efficiency, burial depth, strain energy, ADMET safety, and ecotoxicology (fish/daphnia/algae LC₅₀ + bioaccumulation + persistence). Front 1 contains non-dominated ligands: no other ligand beats them across all six objectives simultaneously. Inside each front, ligands are ordered by a compromise score with explicit penalties for PAINS, reactivity, toxicity alerts, geometry warnings, excluded poses, and artifact annotations. The top 200 are returned using a diversity-aware selection step.
Methodology ▼ show
1. Candidate definition. For each target we keep one best pose per ligand, so the shortlist is not inflated by many similar poses of the same compound.
2. Objective set. Each ligand is evaluated across docking quality, absolute nonpolar solvent exposure (`n_exposed`), conformational strain, native-like interaction similarity when a native reference exists, safety and ecotoxicology, synthesizability, and general developability indicators such as QED.
2a. SASA / burial source. `SASA: done` = cached FreeSASA metrics. `queued/running` = background worker scheduled. `failed` = worker failed. `missing` = no SASA cached yet.
3. Liability penalties. PAINS motifs, reactive groups, toxicity alerts, artifact annotations, geometry warnings, and excluded-pose flags reduce the compromise score and are shown explicitly.
4. Pareto ranking. Front 1 = non-dominated ligands (no other ligand is better in all objectives simultaneously). Lower front number = more balanced profile.
5. Missing SASA handling. Missing SASA lowers `Data completeness` to `Provisional` but does not automatically reject a ligand. Binding and geometry axes stay independent.
6. Compromise score. `100 × clamp(weighted positive − liability penalty − missing-data penalty)`. Weights: docking 28%, burial 18%, strain 14%, safety/ecotox 18%, synthesis 10%, native similarity 12% (when reference exists).
7. Component details. Docking = `final_rank_score` 55% + `score_inter_norm` 30% + raw `score` 15%. Strain = `strain_delta` 55% + `score_intra_norm` 30% + geometry sanity 15%.
8. Final shortlist. Top 50 per target taken front-by-front with diversity-aware selection — near-duplicate analogs do not dominate.
How to read the table. `Pareto` = non-dominated layer, `Compromise` = within-front ordering score, `n_exposed` = burial proxy (lower is better), `Strain dE` = conformational stress, colored dots = quick green/orange/red cue.
How to use selections. Mark compounds row-by-row, save to `Current`/`Temp`/`A/B/C` sets, export to SDF/XLSX/CSV, or send to downstream analysis pages.