FAIRMol

KB_Leish_38

ID 3087

DB fairmolThis detail page is pinned to the current database context.
2D structure

SMILES: CN(Cc1nc2cc(C(=O)NCC3CCCCC3)ccc2[nH]1)[C@H]1CCCc2cccnc21

Formula: C26H33N5O | MW: 431.58400000000023

LogP: 4.7774000000000045 | TPSA: 73.91

HBA/HBD: 4/2 | RotB: 6

InChIKey: WIUYJVNXGQVLEG-QHCPKHFHSA-N

Recognized patterns

Click a named motif to highlight it in the 2D depiction or launch reverse search.
Highlighted: 1 pattern Hinge binder (C=O-NH) Clear highlight

Properties

NameValueUnit
DOCK_BASE_INTER_RANK-1.166610-
DOCK_BOND_LENGTH_OUTLIERS0.000000-
DOCK_CLASH_COUNT13.000000-
DOCK_CONTACT_COUNT16.000000-
DOCK_EXPERIMENTT08-
DOCK_EXPERIMENT_ID8-
DOCK_FINAL_RANK1.586959-
DOCK_GEOMETRY_ALERTwarning-
DOCK_GEOM_OK0-
DOCK_HARD_GEOMETRY_FAIL0-
DOCK_IFP::A:ARG141-
DOCK_IFP::A:ASP1611-
DOCK_IFP::A:CYS1681-
DOCK_IFP::A:GLY2051-
DOCK_IFP::A:LEU2081-
DOCK_IFP::A:LEU2091-
DOCK_IFP::A:LYS131-
DOCK_IFP::A:LYS1781-
DOCK_IFP::A:MET1631-
DOCK_IFP::A:MET2131-
DOCK_IFP::A:NAP3011-
DOCK_IFP::A:PHE971-
DOCK_IFP::A:PRO2101-
DOCK_IFP::A:TRP2211-
DOCK_IFP::A:TYR1741-
DOCK_IFP::A:VAL2061-
DOCK_IMPORT_SCOPEbest_by_name-
DOCK_MAX_CLASH_OVERLAP0.635616-
DOCK_POSE_COUNT1-
DOCK_PRE_RANK1.555199-
DOCK_PRIMARY_POSE_ID4886-
DOCK_RANKING_MODEinter_strain_penalized-
DOCK_REPORT_IDselection_import_t08-
DOCK_RESIDUE_CONTACTSA:ARG14;A:ASP161;A:CYS168;A:GLY205;A:LEU208;A:LEU209;A:LYS13;A:LYS178;A:MET163;A:MET213;A:NAP301;A:PHE97;A:PRO210;A:TRP221;A:TYR174;A:VAL206-
DOCK_SCAFFOLDO=C(NCC1CCCCC1)c1ccc2[nH]c(CNC3CCCc4cccnc43)nc2c1-
DOCK_SCORE-35.180100-
DOCK_SCORE_INTER-37.331600-
DOCK_SCORE_INTER_KCAL-8.916503-
DOCK_SCORE_INTER_NORM-1.166610-
DOCK_SCORE_INTRA2.151580-
DOCK_SCORE_INTRA_KCAL0.513896-
DOCK_SCORE_INTRA_NORM0.067237-
DOCK_SCORE_KCAL-8.402626-
DOCK_SCORE_NORM-1.099380-
DOCK_SCORE_RESTR0.000000-
DOCK_SCORE_RESTR_NORM0.000000-
DOCK_SCORE_SYSTEM0.000000-
DOCK_SCORE_SYSTEM_NORM0.000000-
DOCK_SELECTION_EXCLUDED0-
DOCK_SEVERE_CLASH_COUNT0.000000-
DOCK_SOURCE_FILET08_top5_kcal_zscore_compound_names.sdf-
DOCK_SOURCE_FORMULAC26H33N5O-
DOCK_SOURCE_HBA4.000000-
DOCK_SOURCE_HBD2.000000-
DOCK_SOURCE_HEAVY_ATOMS32.000000-
DOCK_SOURCE_LOGP4.777400-
DOCK_SOURCE_MW431.584000-
DOCK_SOURCE_NAMEKB_Leish_38-
DOCK_SOURCE_RINGS5.000000-
DOCK_SOURCE_TPSA73.910000-
DOCK_STRAIN_DELTA24.694746-
DOCK_STRAIN_OK1-
DOCK_TARGETT08-
EXACT_MASS431.26851067600006Da
FORMULAC26H33N5O-
HBA4-
HBD2-
LOGP4.7774000000000045-
MOL_WEIGHT431.58400000000023g/mol
QED_SCORE0.5891720510676383-
ROTATABLE_BONDS6-
TPSA73.91A^2

Docking across targets

This compound is global in the current database. Below you can review all docking experiments and targets that contain imported poses for it, which is the basis for reverse docking analysis.

TargetExperimentReportPosesBest rankBest scoreNative overlapNative recallRMSD
T08 T08 selection_import_t08 1
native pose available
1.586959105448219 -35.1801 14 0.74 - Best pose
T08 — T08 1 poses · report selection_import_t08
Native comparison is calculated against the uploaded native ligand for the same experiment/target whenever it is available.
PoseFinal rankInter normScoreHBContactsNative overlapNative recallHB strictHB roleHB residueRMSDExcludedNotes
145 1.586959105448219 -1.16661 -35.1801 5 16 14 0.74 0.50 0.60 0.60 - no geometry warning; 13 clashes; 1 protein clash; 1 cofactor-context clash; moderate strain Δ 24.7 Open pose
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Drug Similarity

Shared structural fragments with approved drugs — based on faircheckmol profile fingerprint.
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Structural Profile Fingerprint

Named-bit fingerprint from curated SMARTS patterns. Each bit = one chemical pattern.

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ADMET Profile

Computed from structure using RDKit. Indicative only — not a substitute for experimental data.

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3D Conformer

ETKDGv3 conformer generation with UFF minimisation. Rendered with 3Dmol.js.

This docking hit has a stored pose-level complex analysis page with clickable hydrogen bonds, π–π contacts, hydrophobic contacts, and clash inspection.
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