FAIRMol

Z226978722

ID 2102

DB SELECTIONThis detail page is pinned to the current database context.
Back to results Open docking pose (2)
2D structure

SMILES: Cc1nc2c3ccccc3nc(SCc3cn4ccccc4n3)n2n1

Formula: C18H14N6S | MW: 346.419

LogP: 3.525920000000003 | TPSA: 60.379999999999995

HBA/HBD: 5/- | RotB: 3

InChIKey: MMXXQLPIJCZTPV-UHFFFAOYSA-N

Recognized patterns

Click a named motif to highlight it in the 2D depiction or launch reverse search.
Highlighted: 1 pattern Pyridine Clear highlight

Bio motif

ATP mimic pyrimidine H-bond acceptor N ×6 Gatekeeper aromatic

Functional group

Sulfide

Ring system

Benzene Pyridine Pyrimidine Imidazo[1,2-a]pyridine

Properties

NameValueUnit
DOCK_BASE_INTER_RANK-1.123400-
DOCK_BASE_INTER_RANK-0.774880-
DOCK_BOND_LENGTH_OUTLIERS0.000000-
DOCK_BOND_LENGTH_OUTLIERS0.000000-
DOCK_CLASH_COUNT10.000000-
DOCK_CLASH_COUNT9.000000-
DOCK_CONTACT_COUNT12.000000-
DOCK_CONTACT_COUNT6.000000-
DOCK_EXPERIMENTT05-
DOCK_EXPERIMENTT20-
DOCK_EXPERIMENT_ID5-
DOCK_EXPERIMENT_ID20-
DOCK_FINAL_RANK1.873101-
DOCK_FINAL_RANK1.891007-
DOCK_GEOMETRY_ALERTwarning-
DOCK_GEOMETRY_ALERTwarning-
DOCK_GEOM_OK0-
DOCK_GEOM_OK0-
DOCK_HARD_GEOMETRY_FAIL0-
DOCK_HARD_GEOMETRY_FAIL0-
DOCK_IFP::A:ARG171-
DOCK_IFP::A:ASN4021-
DOCK_IFP::A:ASP1811-
DOCK_IFP::A:GLU4671-
DOCK_IFP::A:GLY2251-
DOCK_IFP::A:LEU2261-
DOCK_IFP::A:LEU2291-
DOCK_IFP::A:LEU3991-
DOCK_IFP::A:MET1831-
DOCK_IFP::A:NDP3021-
DOCK_IFP::A:PHE1131-
DOCK_IFP::A:PHE3961-
DOCK_IFP::A:PRO3981-
DOCK_IFP::A:SER2271-
DOCK_IFP::A:THR3971-
DOCK_IFP::A:TYR1941-
DOCK_IFP::A:VAL2301-
DOCK_IFP::D:ARG2871-
DOCK_IMPORT_SCOPEbest_by_name-
DOCK_IMPORT_SCOPEbest_by_name-
DOCK_MAX_CLASH_OVERLAP0.633032-
DOCK_MAX_CLASH_OVERLAP0.610137-
DOCK_POSE_COUNT1-
DOCK_POSE_COUNT1-
DOCK_PRE_RANK1.839437-
DOCK_PRE_RANK1.866707-
DOCK_PRIMARY_POSE_ID3241-
DOCK_PRIMARY_POSE_ID13435-
DOCK_RANKING_MODEinter_strain_penalized-
DOCK_RANKING_MODEinter_strain_penalized-
DOCK_REPORT_IDselection_import_t05-
DOCK_REPORT_IDselection_import_t20-
DOCK_RESIDUE_CONTACTSA:ARG17;A:ASP181;A:GLY225;A:LEU226;A:LEU229;A:MET183;A:NDP302;A:PHE113;A:SER227;A:TYR194;A:VAL230;D:ARG287-
DOCK_RESIDUE_CONTACTSA:ASN402;A:GLU467;A:LEU399;A:PHE396;A:PRO398;A:THR397-
DOCK_SCAFFOLDc1ccc2c(c1)nc(SCc1cn3ccccc3n1)n1ncnc21-
DOCK_SCAFFOLDc1ccc2c(c1)nc(SCc1cn3ccccc3n1)n1ncnc21-
DOCK_SCORE-26.040700-
DOCK_SCORE-19.161400-
DOCK_SCORE_INTER-28.085000-
DOCK_SCORE_INTER-19.372000-
DOCK_SCORE_INTER_KCAL-6.707990-
DOCK_SCORE_INTER_KCAL-4.626925-
DOCK_SCORE_INTER_NORM-1.123400-
DOCK_SCORE_INTER_NORM-0.774880-
DOCK_SCORE_INTRA2.044350-
DOCK_SCORE_INTRA0.210592-
DOCK_SCORE_INTRA_KCAL0.488285-
DOCK_SCORE_INTRA_KCAL0.050299-
DOCK_SCORE_INTRA_NORM0.081774-
DOCK_SCORE_INTRA_NORM0.008424-
DOCK_SCORE_KCAL-6.219717-
DOCK_SCORE_KCAL-4.576624-
DOCK_SCORE_NORM-1.041630-
DOCK_SCORE_NORM-0.766456-
DOCK_SCORE_RESTR0.000000-
DOCK_SCORE_RESTR0.000000-
DOCK_SCORE_RESTR_NORM0.000000-
DOCK_SCORE_RESTR_NORM0.000000-
DOCK_SCORE_SYSTEM0.000000-
DOCK_SCORE_SYSTEM0.000000-
DOCK_SCORE_SYSTEM_NORM0.000000-
DOCK_SCORE_SYSTEM_NORM0.000000-
DOCK_SELECTION_EXCLUDED0-
DOCK_SELECTION_EXCLUDED0-
DOCK_SEVERE_CLASH_COUNT0.000000-
DOCK_SEVERE_CLASH_COUNT0.000000-
DOCK_SOURCE_FILET05_top5_kcal_zscore_compound_names.sdf-
DOCK_SOURCE_FILET20_top5_kcal_zscore_compound_names.sdf-
DOCK_SOURCE_FORMULAC18H14N6S-
DOCK_SOURCE_FORMULAC18H14N6S-
DOCK_SOURCE_HBA5.000000-
DOCK_SOURCE_HBA5.000000-
DOCK_SOURCE_HBD0.000000-
DOCK_SOURCE_HBD0.000000-
DOCK_SOURCE_HEAVY_ATOMS25.000000-
DOCK_SOURCE_HEAVY_ATOMS25.000000-
DOCK_SOURCE_LOGP3.525920-
DOCK_SOURCE_LOGP3.525920-
DOCK_SOURCE_MW346.419000-
DOCK_SOURCE_MW346.419000-
DOCK_SOURCE_NAMEZ226978722-
DOCK_SOURCE_NAMEZ226978722-
DOCK_SOURCE_RINGS5.000000-
DOCK_SOURCE_RINGS5.000000-
DOCK_SOURCE_TPSA60.380000-
DOCK_SOURCE_TPSA60.380000-
DOCK_STRAIN_DELTA25.887734-
DOCK_STRAIN_DELTA19.489433-
DOCK_STRAIN_OK1-
DOCK_STRAIN_OK1-
DOCK_TARGETT05-
DOCK_TARGETT20-
EXACT_MASS346.10006544800007Da
FORMULAC18H14N6S-
HBA5-
HBD0-
LOGP3.525920000000003-
MOL_WEIGHT346.419g/mol
QED_SCORE0.3693989286227736-
ROTATABLE_BONDS3-
TPSA60.379999999999995A^2

Docking across targets

This compound is global in the current database. Below you can review all docking experiments and targets that contain imported poses for it, which is the basis for reverse docking analysis.

Open primary docking pose Docking experiments Reverse docking explorer Protein structures Docking IFP projection
TargetExperimentReportPosesBest rankBest scoreNative overlapNative recallRMSD
T05 T05 selection_import_t05 1
native pose available
 1.8731009528347602 -26.0407 10 0.59 - Best pose
T20 T20 selection_import_t20 1
native pose available
 1.891007351008683 -19.1614 6 0.75 - Best pose
T05 — T05 1 poses · report selection_import_t05
Native comparison is calculated against the uploaded native ligand for the same experiment/target whenever it is available.
PoseFinal rankInter normScoreHBContactsNative overlapNative recallHB strictHB roleHB residueRMSDExcludedNotes
531 1.8731009528347602 -1.1234 -26.0407 4 12 10 0.59 0.29 0.33 0.60 - no geometry warning; 10 clashes; 1 protein clash; 3 cofactor-context clashes; moderate strain Δ 25.9 Open pose
T20 — T20 1 poses · report selection_import_t20
Native comparison is calculated against the uploaded native ligand for the same experiment/target whenever it is available.
PoseFinal rankInter normScoreHBContactsNative overlapNative recallHB strictHB roleHB residueRMSDExcludedNotes
556 1.891007351008683 -0.77488 -19.1614 4 6 6 0.75 0.00 0.00 0.00 - no geometry warning; 9 clashes; 1 protein clash Open pose
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Drug Similarity

Shared structural fragments with approved drugs — based on faircheckmol profile fingerprint.
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Structural Profile Fingerprint

Named-bit fingerprint from curated SMARTS patterns. Each bit = one chemical pattern.

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ADMET Profile

Computed from structure using RDKit. Indicative only — not a substitute for experimental data.

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3D Conformer

ETKDGv3 conformer generation with UFF minimisation. Rendered with 3Dmol.js.

Open receptor–ligand complex
This docking hit has a stored pose-level complex analysis page with clickable hydrogen bonds, π–π contacts, hydrophobic contacts, and clash inspection.
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