FAIRMol

Z14242918

ID 1337

DB fairmolThis detail page is pinned to the current database context.
Back to results Open docking pose (1)
2D structure

SMILES: C[C@@H]1CCCC[C@@]12NC(=O)N(CC(=O)NC(=O)Nc1ccc3c(c1)OCCO3)C2=O

Formula: C20H24N4O6 | MW: 416.43400000000014

LogP: 1.6065999999999991 | TPSA: 126.07000000000002

HBA/HBD: 6/3 | RotB: 3

InChIKey: LFNVAVJHMCQXIY-MPBGBICISA-N

Recognized patterns

Click a named motif to highlight it in the 2D depiction or launch reverse search.
Highlighted: 1 pattern Urea Clear highlight

Bio motif

Catechol Peptide backbone ×2 Hinge binder (C=O-NH) ×4 Hinge binder (NH-C=O) ×4 N-Methyl amide ×4 H-bond acceptor N H-bond acceptor O ×6 H-bond donor ×3 Gatekeeper aromatic Metal chelator ×6 Retro-amide ×2 P-gp efflux flag

Functional group

Carbonyl ×4 Amide ×6 Secondary amine ×3 Tertiary amine Lactam ×3 Urea ×2 Aryl ether ×2 Imide ×2 Ether ×2

Ring system

Benzene Benzodioxane Cyclohexane Imidazolidine

Properties

NameValueUnit
DOCK_BASE_INTER_RANK-0.892561-
DOCK_BOND_LENGTH_OUTLIERS0.000000-
DOCK_CLASH_COUNT6.000000-
DOCK_CONTACT_COUNT17.000000-
DOCK_EXPERIMENTT03-
DOCK_EXPERIMENT_ID3-
DOCK_FINAL_RANK2.767168-
DOCK_GEOMETRY_ALERTwarning-
DOCK_GEOM_OK0-
DOCK_HARD_GEOMETRY_FAIL0-
DOCK_IFP::A:ALA321-
DOCK_IFP::A:ARG971-
DOCK_IFP::A:ASP521-
DOCK_IFP::A:ILE451-
DOCK_IFP::A:LYS571-
DOCK_IFP::A:LYS951-
DOCK_IFP::A:MET531-
DOCK_IFP::A:NDP3011-
DOCK_IFP::A:PHE561-
DOCK_IFP::A:PHE911-
DOCK_IFP::A:THR541-
DOCK_IFP::A:THR831-
DOCK_IFP::A:TRP471-
DOCK_IFP::A:TYR1621-
DOCK_IFP::A:VAL1561-
DOCK_IFP::A:VAL301-
DOCK_IFP::A:VAL311-
DOCK_IMPORT_SCOPEbest_by_name-
DOCK_MAX_CLASH_OVERLAP0.655256-
DOCK_POSE_COUNT1-
DOCK_PRE_RANK2.685969-
DOCK_PRIMARY_POSE_ID1934-
DOCK_RANKING_MODEinter_strain_penalized-
DOCK_REPORT_IDselection_import_t03-
DOCK_RESIDUE_CONTACTSA:ALA32;A:ARG97;A:ASP52;A:ILE45;A:LYS57;A:LYS95;A:MET53;A:NDP301;A:PHE56;A:PHE91;A:THR54;A:THR83;A:TRP47;A:TYR162;A:VAL156;A:VAL30;A:VAL31-
DOCK_SCAFFOLDO=C(CN1C(=O)NC2(CCCCC2)C1=O)NC(=O)Nc1ccc2c(c1)OCCO2-
DOCK_SCORE-22.418400-
DOCK_SCORE_INTER-26.776800-
DOCK_SCORE_INTER_KCAL-6.395532-
DOCK_SCORE_INTER_NORM-0.892561-
DOCK_SCORE_INTRA4.358400-
DOCK_SCORE_INTRA_KCAL1.040986-
DOCK_SCORE_INTRA_NORM0.145280-
DOCK_SCORE_KCAL-5.354545-
DOCK_SCORE_NORM-0.747281-
DOCK_SCORE_RESTR0.000000-
DOCK_SCORE_RESTR_NORM0.000000-
DOCK_SCORE_SYSTEM0.000000-
DOCK_SCORE_SYSTEM_NORM0.000000-
DOCK_SELECTION_EXCLUDED0-
DOCK_SEVERE_CLASH_COUNT0.000000-
DOCK_SOURCE_FILET03_top5_kcal_zscore_compound_names.sdf-
DOCK_SOURCE_FORMULAC20H24N4O6-
DOCK_SOURCE_HBA6.000000-
DOCK_SOURCE_HBD3.000000-
DOCK_SOURCE_HEAVY_ATOMS30.000000-
DOCK_SOURCE_LOGP1.606600-
DOCK_SOURCE_MW416.434000-
DOCK_SOURCE_NAMEZ14242918-
DOCK_SOURCE_RINGS4.000000-
DOCK_SOURCE_TPSA126.070000-
DOCK_STRAIN_DELTA48.448473-
DOCK_STRAIN_OK0-
DOCK_TARGETT03-
EXACT_MASS416.16958448799994Da
FORMULAC20H24N4O6-
HBA6-
HBD3-
LOGP1.6065999999999991-
MOL_WEIGHT416.43400000000014g/mol
QED_SCORE0.6428938762680819-
ROTATABLE_BONDS3-
TPSA126.07000000000002A^2

Docking across targets

This compound is global in the current database. Below you can review all docking experiments and targets that contain imported poses for it, which is the basis for reverse docking analysis.

Open primary docking pose Docking experiments Reverse docking explorer Protein structures Docking IFP projection
TargetExperimentReportPosesBest rankBest scoreNative overlapNative recallRMSD
T03 T03 selection_import_t03 1
native pose available
 2.7671683937881086 -22.4184 15 0.75 - Best pose
T03 — T03 1 poses · report selection_import_t03
Native comparison is calculated against the uploaded native ligand for the same experiment/target whenever it is available.
PoseFinal rankInter normScoreHBContactsNative overlapNative recallHB strictHB roleHB residueRMSDExcludedNotes
579 2.7671683937881086 -0.892561 -22.4184 4 17 15 0.75 0.14 0.20 0.20 - no geometry warning; 6 clashes; 2 protein clashes; high strain Δ 48.4 Open pose
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Drug Similarity

Shared structural fragments with approved drugs — based on faircheckmol profile fingerprint.
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Structural Profile Fingerprint

Named-bit fingerprint from curated SMARTS patterns. Each bit = one chemical pattern.

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ADMET Profile

Computed from structure using RDKit. Indicative only — not a substitute for experimental data.

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3D Conformer

ETKDGv3 conformer generation with UFF minimisation. Rendered with 3Dmol.js.

Open receptor–ligand complex
This docking hit has a stored pose-level complex analysis page with clickable hydrogen bonds, π–π contacts, hydrophobic contacts, and clash inspection.
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